Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC073648.6-201ENST00000641589 218 ntBASIC17.93■□□□□ 0.46
RNF144AP50876 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF144AP50876 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF144AP50876 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.92■□□□□ 0.46
RNF144AP50876 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 KRT17P3-201ENST00000420566 1262 ntBASIC17.92■□□□□ 0.46
RNF144AP50876 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RNF144AP50876 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 AL121829.2-201ENST00000620908 328 ntBASIC17.92■□□□□ 0.46
RNF144AP50876 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF144AP50876 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF144AP50876 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF144AP50876 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF144AP50876 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RNF144AP50876 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF144AP50876 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF144AP50876 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF144AP50876 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF144AP50876 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF144AP50876 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF144AP50876 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF144AP50876 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF144AP50876 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF144AP50876 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF144AP50876 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 KRASP1-201ENST00000407852 552 ntBASIC17.9■□□□□ 0.46
RNF144AP50876 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF144AP50876 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RNF144AP50876 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF144AP50876 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 MTDHP1-201ENST00000605323 784 ntBASIC17.9■□□□□ 0.46
RNF144AP50876 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF144AP50876 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF144AP50876 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF144AP50876 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RNF144AP50876 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RNF144AP50876 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RNF144AP50876 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF144AP50876 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms