Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CTSKP43235 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSKP43235 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTSKP43235 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
CTSKP43235 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 GABARAPL3-202ENST00000624044 1851 ntBASIC19.2■□□□□ 0.66
CTSKP43235 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CTSKP43235 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSKP43235 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSKP43235 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.2■□□□□ 0.66
CTSKP43235 FAM207BP-201ENST00000447172 505 ntBASIC19.2■□□□□ 0.66
CTSKP43235 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSKP43235 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CTSKP43235 AC116562.4-202ENST00000641738 218 ntBASIC19.2■□□□□ 0.66
CTSKP43235 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.2■□□□□ 0.66
CTSKP43235 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.2■□□□□ 0.66
CTSKP43235 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CTSKP43235 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CTSKP43235 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.2■□□□□ 0.66
CTSKP43235 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.2■□□□□ 0.66
CTSKP43235 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.2■□□□□ 0.66
CTSKP43235 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTSKP43235 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
CTSKP43235 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CTSKP43235 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.19■□□□□ 0.66
CTSKP43235 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CTSKP43235 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSKP43235 AC063952.2-201ENST00000498792 1227 ntBASIC19.19■□□□□ 0.66
CTSKP43235 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.19■□□□□ 0.66
CTSKP43235 AC022616.7-201ENST00000525383 220 ntBASIC19.19■□□□□ 0.66
CTSKP43235 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CTSKP43235 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.19■□□□□ 0.66
CTSKP43235 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.19■□□□□ 0.66
CTSKP43235 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTSKP43235 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSKP43235 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSKP43235 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.19■□□□□ 0.66
CTSKP43235 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTSKP43235 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSKP43235 TMEM179-206ENST00000616017 1645 ntBASIC19.18■□□□□ 0.66
CTSKP43235 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTSKP43235 AC117947.1-201ENST00000427448 529 ntBASIC19.18■□□□□ 0.66
CTSKP43235 CCR12P-201ENST00000446203 998 ntBASIC19.18■□□□□ 0.66
CTSKP43235 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSKP43235 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSKP43235 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CTSKP43235 AL138966.2-201ENST00000621997 464 ntBASIC19.18■□□□□ 0.66
CTSKP43235 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.18■□□□□ 0.66
CTSKP43235 AP005212.1-201ENST00000581547 1997 ntBASIC19.18■□□□□ 0.66
CTSKP43235 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
CTSKP43235 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTSKP43235 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSKP43235 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSKP43235 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSKP43235 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSKP43235 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSKP43235 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.17■□□□□ 0.66
CTSKP43235 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms