Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 AC087499.1-201ENST00000418141 1075 ntBASIC20.92■□□□□ 0.94
TNFSF9P41273 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF9P41273 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.92■□□□□ 0.94
TNFSF9P41273 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF9P41273 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF9P41273 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF9P41273 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF9P41273 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.91■□□□□ 0.94
TNFSF9P41273 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.91■□□□□ 0.94
TNFSF9P41273 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF9P41273 AP000692.2-201ENST00000608391 879 ntBASIC20.91■□□□□ 0.94
TNFSF9P41273 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF9P41273 AC007952.6-201ENST00000573168 2673 ntBASIC20.91■□□□□ 0.94
TNFSF9P41273 AC003957.1-201ENST00000625108 2673 ntBASIC20.91■□□□□ 0.94
TNFSF9P41273 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TNFSF9P41273 MMP23A-201ENST00000234610 1017 ntBASIC20.9■□□□□ 0.94
TNFSF9P41273 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 FAM207BP-201ENST00000447172 505 ntBASIC20.9■□□□□ 0.94
TNFSF9P41273 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 AC097488.1-201ENST00000507834 756 ntBASIC20.9■□□□□ 0.94
TNFSF9P41273 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.9■□□□□ 0.94
TNFSF9P41273 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.9■□□□□ 0.94
TNFSF9P41273 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF9P41273 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TNFSF9P41273 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.9■□□□□ 0.94
TNFSF9P41273 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.89■□□□□ 0.94
TNFSF9P41273 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.89■□□□□ 0.94
TNFSF9P41273 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TNFSF9P41273 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.89■□□□□ 0.94
TNFSF9P41273 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFSF9P41273 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFSF9P41273 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 FITM1-202ENST00000559294 800 ntBASIC20.89■□□□□ 0.93
TNFSF9P41273 DGCR10-201ENST00000609839 495 ntBASIC20.89■□□□□ 0.93
TNFSF9P41273 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFSF9P41273 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.89■□□□□ 0.93
TNFSF9P41273 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF9P41273 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.89■□□□□ 0.93
TNFSF9P41273 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF9P41273 CYP2D8P-201ENST00000433633 1490 ntBASIC20.88■□□□□ 0.93
TNFSF9P41273 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF9P41273 AC093484.2-201ENST00000580996 2166 ntBASIC20.88■□□□□ 0.93
TNFSF9P41273 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms