Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNFP41002 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNFP41002 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNFP41002 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.4■□□□□ 0.7
CCNFP41002 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 UNC93B5-201ENST00000530315 699 ntBASIC19.4■□□□□ 0.7
CCNFP41002 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCNFP41002 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNFP41002 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.4■□□□□ 0.7
CCNFP41002 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.4■□□□□ 0.7
CCNFP41002 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCNFP41002 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCNFP41002 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCNFP41002 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCNFP41002 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CCNFP41002 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNFP41002 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNFP41002 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCNFP41002 SOX15-203ENST00000570788 1093 ntBASIC19.39■□□□□ 0.69
CCNFP41002 AC006557.6-201ENST00000623071 864 ntBASIC19.39■□□□□ 0.69
CCNFP41002 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNFP41002 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.39■□□□□ 0.69
CCNFP41002 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCNFP41002 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.39■□□□□ 0.69
CCNFP41002 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCNFP41002 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.38■□□□□ 0.69
CCNFP41002 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.38■□□□□ 0.69
CCNFP41002 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNFP41002 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNFP41002 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
CCNFP41002 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNFP41002 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNFP41002 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.38■□□□□ 0.69
CCNFP41002 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.38■□□□□ 0.69
CCNFP41002 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.38■□□□□ 0.69
CCNFP41002 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCNFP41002 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms