Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABRA3P34903 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABRA3P34903 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABRA3P34903 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GABRA3P34903 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
GABRA3P34903 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.96■□□□□ 0.47
GABRA3P34903 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.96■□□□□ 0.46
GABRA3P34903 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
GABRA3P34903 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.95■□□□□ 0.46
GABRA3P34903 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.95■□□□□ 0.46
GABRA3P34903 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 RPPH1-201ENST00000516869 333 ntBASIC17.95■□□□□ 0.46
GABRA3P34903 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.95■□□□□ 0.46
GABRA3P34903 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.95■□□□□ 0.46
GABRA3P34903 C1QL1P1-201ENST00000568105 661 ntBASIC17.95■□□□□ 0.46
GABRA3P34903 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GABRA3P34903 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABRA3P34903 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
GABRA3P34903 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.94■□□□□ 0.46
GABRA3P34903 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
GABRA3P34903 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.94■□□□□ 0.46
GABRA3P34903 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
GABRA3P34903 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.94■□□□□ 0.46
GABRA3P34903 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.94■□□□□ 0.46
GABRA3P34903 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.94■□□□□ 0.46
GABRA3P34903 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.94■□□□□ 0.46
GABRA3P34903 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 SDHAP1-207ENST00000440850 2000 ntBASIC17.94■□□□□ 0.46
GABRA3P34903 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.94■□□□□ 0.46
GABRA3P34903 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 LINC01465-201ENST00000408887 1940 ntBASIC17.94■□□□□ 0.46
GABRA3P34903 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABRA3P34903 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GABRA3P34903 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.93■□□□□ 0.46
GABRA3P34903 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
GABRA3P34903 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GABRA3P34903 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GABRA3P34903 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.93■□□□□ 0.46
GABRA3P34903 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABRA3P34903 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GABRA3P34903 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.93■□□□□ 0.46
GABRA3P34903 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.93■□□□□ 0.46
GABRA3P34903 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.92■□□□□ 0.46
GABRA3P34903 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.92■□□□□ 0.46
GABRA3P34903 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GABRA3P34903 AC138932.1-201ENST00000534164 6830 ntBASIC17.92■□□□□ 0.46
GABRA3P34903 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.92■□□□□ 0.46
GABRA3P34903 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABRA3P34903 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms