Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.32■□□□□ 0.2
COL8A2P25067 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.32■□□□□ 0.2
COL8A2P25067 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.31■□□□□ 0.2
COL8A2P25067 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 RCN1P1-201ENST00000400413 996 ntBASIC16.31■□□□□ 0.2
COL8A2P25067 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 AC091390.4-202ENST00000476426 537 ntBASIC16.31■□□□□ 0.2
COL8A2P25067 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.31■□□□□ 0.2
COL8A2P25067 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.31■□□□□ 0.2
COL8A2P25067 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.31■□□□□ 0.2
COL8A2P25067 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.31■□□□□ 0.2
COL8A2P25067 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.31■□□□□ 0.2
COL8A2P25067 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL8A2P25067 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COL8A2P25067 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.3■□□□□ 0.2
COL8A2P25067 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 FAM207BP-201ENST00000447172 505 ntBASIC16.3■□□□□ 0.2
COL8A2P25067 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.3■□□□□ 0.2
COL8A2P25067 Z85996.1-201ENST00000494644 937 ntBASIC16.3■□□□□ 0.2
COL8A2P25067 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.3■□□□□ 0.2
COL8A2P25067 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.3■□□□□ 0.2
COL8A2P25067 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
COL8A2P25067 DGCR10-201ENST00000609839 495 ntBASIC16.3■□□□□ 0.2
COL8A2P25067 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.3■□□□□ 0.2
COL8A2P25067 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
COL8A2P25067 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
COL8A2P25067 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COL8A2P25067 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL8A2P25067 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.29■□□□□ 0.2
COL8A2P25067 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
COL8A2P25067 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.29■□□□□ 0.2
COL8A2P25067 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.29■□□□□ 0.2
COL8A2P25067 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.29■□□□□ 0.2
COL8A2P25067 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL8A2P25067 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.29■□□□□ 0.2
COL8A2P25067 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL8A2P25067 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL8A2P25067 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL8A2P25067 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL8A2P25067 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.28■□□□□ 0.2
COL8A2P25067 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL8A2P25067 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.28■□□□□ 0.2
COL8A2P25067 KRT18P22-201ENST00000402024 1347 ntBASIC16.28■□□□□ 0.2
COL8A2P25067 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
COL8A2P25067 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL8A2P25067 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms