Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP11P24347 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP11P24347 AC079598.2-202ENST00000546624 1451 ntBASIC18.33■□□□□ 0.53
MMP11P24347 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MMP11P24347 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MMP11P24347 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP11P24347 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP11P24347 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
MMP11P24347 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.33■□□□□ 0.52
MMP11P24347 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP11P24347 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.33■□□□□ 0.52
MMP11P24347 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.33■□□□□ 0.52
MMP11P24347 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP11P24347 AC026271.3-201ENST00000571884 352 ntBASIC18.33■□□□□ 0.52
MMP11P24347 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP11P24347 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MMP11P24347 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 AC018445.3-201ENST00000624177 1945 ntBASIC18.33■□□□□ 0.52
MMP11P24347 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
MMP11P24347 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP11P24347 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP11P24347 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MMP11P24347 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MMP11P24347 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
MMP11P24347 AP000525.1-201ENST00000608286 694 ntBASIC18.32■□□□□ 0.52
MMP11P24347 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP11P24347 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP11P24347 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP11P24347 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP11P24347 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP11P24347 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MMP11P24347 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MMP11P24347 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP11P24347 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP11P24347 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP11P24347 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP11P24347 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP11P24347 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP11P24347 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 FSCN1P1-201ENST00000568912 1481 ntBASIC18.31■□□□□ 0.52
MMP11P24347 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP11P24347 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.31■□□□□ 0.52
MMP11P24347 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP11P24347 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP11P24347 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.3■□□□□ 0.52
MMP11P24347 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP11P24347 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP11P24347 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP11P24347 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP11P24347 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP11P24347 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP11P24347 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP11P24347 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.3■□□□□ 0.52
MMP11P24347 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP11P24347 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP11P24347 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms