Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A1P20908 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.57■□□□□ 0.56
COL5A1P20908 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A1P20908 AC012313.10-201ENST00000623509 926 ntBASIC18.57■□□□□ 0.56
COL5A1P20908 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL5A1P20908 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A1P20908 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL5A1P20908 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL5A1P20908 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL5A1P20908 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A1P20908 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.57■□□□□ 0.56
COL5A1P20908 LINC01311-201ENST00000565162 1445 ntBASIC18.57■□□□□ 0.56
COL5A1P20908 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL5A1P20908 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 AL162377.1-201ENST00000618844 1793 ntBASIC18.56■□□□□ 0.56
COL5A1P20908 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A1P20908 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COL5A1P20908 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL5A1P20908 AL645929.1-201ENST00000420084 975 ntBASIC18.56■□□□□ 0.56
COL5A1P20908 TSPY21P-201ENST00000433481 731 ntBASIC18.56■□□□□ 0.56
COL5A1P20908 TSPY23P-201ENST00000440136 739 ntBASIC18.56■□□□□ 0.56
COL5A1P20908 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.56■□□□□ 0.56
COL5A1P20908 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A1P20908 GCSHP2-201ENST00000560971 527 ntBASIC18.56■□□□□ 0.56
COL5A1P20908 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.56■□□□□ 0.56
COL5A1P20908 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A1P20908 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.56■□□□□ 0.56
COL5A1P20908 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.56■□□□□ 0.56
COL5A1P20908 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 LINC01521-201ENST00000504184 1943 ntBASIC18.55■□□□□ 0.56
COL5A1P20908 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A1P20908 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL5A1P20908 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COL5A1P20908 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.55■□□□□ 0.56
COL5A1P20908 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.55■□□□□ 0.56
COL5A1P20908 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.55■□□□□ 0.56
COL5A1P20908 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.55■□□□□ 0.56
COL5A1P20908 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A1P20908 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A1P20908 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COL5A1P20908 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A1P20908 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.54■□□□□ 0.56
COL5A1P20908 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.54■□□□□ 0.56
COL5A1P20908 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A1P20908 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A1P20908 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A1P20908 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A1P20908 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL5A1P20908 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL5A1P20908 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.53■□□□□ 0.56
COL5A1P20908 AL691432.3-201ENST00000621860 400 ntBASIC18.53■□□□□ 0.56
COL5A1P20908 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL5A1P20908 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL5A1P20908 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.53■□□□□ 0.56
COL5A1P20908 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.53■□□□□ 0.56
COL5A1P20908 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL5A1P20908 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.53■□□□□ 0.56
COL5A1P20908 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.53■□□□□ 0.56
COL5A1P20908 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A1P20908 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms