Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 AL359736.2-201ENST00000621992 437 ntBASIC19.49■□□□□ 0.71
HLA-DPA1P20036 HLA-A-209ENST00000638375 975 ntBASIC19.49■□□□□ 0.71
HLA-DPA1P20036 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DPA1P20036 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPA1P20036 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 FAM197Y4-202ENST00000622692 608 ntBASIC19.47■□□□□ 0.71
HLA-DPA1P20036 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPA1P20036 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 SDHAP1-207ENST00000440850 2000 ntBASIC19.46■□□□□ 0.71
HLA-DPA1P20036 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPA1P20036 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HLA-DPA1P20036 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms