Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.84■□□□□ 0.45
UBL4AP11441 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
UBL4AP11441 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 AC239809.2-201ENST00000415381 517 ntBASIC17.84■□□□□ 0.45
UBL4AP11441 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UBL4AP11441 POU5F1P3-201ENST00000428824 1078 ntBASIC17.84■□□□□ 0.45
UBL4AP11441 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.84■□□□□ 0.45
UBL4AP11441 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.84■□□□□ 0.45
UBL4AP11441 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.84■□□□□ 0.45
UBL4AP11441 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBL4AP11441 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBL4AP11441 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBL4AP11441 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
UBL4AP11441 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBL4AP11441 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBL4AP11441 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBL4AP11441 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
UBL4AP11441 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.83■□□□□ 0.45
UBL4AP11441 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.83■□□□□ 0.44
UBL4AP11441 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.83■□□□□ 0.44
UBL4AP11441 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.83■□□□□ 0.44
UBL4AP11441 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.83■□□□□ 0.44
UBL4AP11441 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 AC073648.6-201ENST00000641589 218 ntBASIC17.83■□□□□ 0.44
UBL4AP11441 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
UBL4AP11441 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBL4AP11441 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
UBL4AP11441 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.82■□□□□ 0.44
UBL4AP11441 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.82■□□□□ 0.44
UBL4AP11441 AC004264.1-201ENST00000608354 794 ntBASIC17.82■□□□□ 0.44
UBL4AP11441 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.82■□□□□ 0.44
UBL4AP11441 AL023875.1-201ENST00000640777 796 ntBASIC17.82■□□□□ 0.44
UBL4AP11441 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBL4AP11441 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UBL4AP11441 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.82■□□□□ 0.44
UBL4AP11441 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
UBL4AP11441 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
UBL4AP11441 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.81■□□□□ 0.44
UBL4AP11441 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
UBL4AP11441 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 KRASP1-201ENST00000407852 552 ntBASIC17.81■□□□□ 0.44
UBL4AP11441 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.81■□□□□ 0.44
UBL4AP11441 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.81■□□□□ 0.44
UBL4AP11441 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms