Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 KRT8P8-201ENST00000434750 1448 ntBASIC20.85■□□□□ 0.93
CCDC172P0C7W6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC172P0C7W6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 AL121829.2-201ENST00000620908 328 ntBASIC20.84■□□□□ 0.93
CCDC172P0C7W6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC172P0C7W6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.83■□□□□ 0.93
CCDC172P0C7W6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 AL109923.1-201ENST00000618799 583 ntBASIC20.83■□□□□ 0.93
CCDC172P0C7W6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC172P0C7W6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC172P0C7W6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC172P0C7W6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC172P0C7W6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.82■□□□□ 0.92
CCDC172P0C7W6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.82■□□□□ 0.92
CCDC172P0C7W6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 AC141586.3-201ENST00000562166 1838 ntBASIC20.82■□□□□ 0.92
CCDC172P0C7W6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC172P0C7W6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC172P0C7W6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms