Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 KRT18P38-201ENST00000449496 1282 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CLDN1O95832 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CLDN1O95832 AC006538.3-201ENST00000612495 578 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 AC011298.2-201ENST00000617989 482 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.23■□□□□ 0.35
CLDN1O95832 AL023973.1-201ENST00000624619 620 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN1O95832 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN1O95832 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN1O95832 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN1O95832 RCC2P6-201ENST00000526625 1557 ntBASIC17.23■□□□□ 0.35
CLDN1O95832 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN1O95832 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN1O95832 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 AC011484.1-201ENST00000377652 1995 ntBASIC17.22■□□□□ 0.35
CLDN1O95832 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 AC092338.2-201ENST00000568827 1415 ntBASIC17.22■□□□□ 0.35
CLDN1O95832 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.22■□□□□ 0.35
CLDN1O95832 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN1O95832 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN1O95832 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN1O95832 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN1O95832 PRSS44-201ENST00000515154 1146 ntBASIC17.22■□□□□ 0.35
CLDN1O95832 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLDN1O95832 AC140113.3-201ENST00000605663 199 ntBASIC17.22■□□□□ 0.35
CLDN1O95832 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN1O95832 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN1O95832 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN1O95832 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN1O95832 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 PTBP1P-201ENST00000554374 1601 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN1O95832 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN1O95832 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN1O95832 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 AC096733.2-201ENST00000609937 1394 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN1O95832 KRT18P16-201ENST00000510337 1294 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN1O95832 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 AL136038.3-201ENST00000561909 1096 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN1O95832 RN7SL510P-201ENST00000581311 263 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 AC023511.2-201ENST00000618803 211 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 MIR2861-201ENST00000636310 90 ntBASIC17.21■□□□□ 0.35
CLDN1O95832 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN1O95832 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN1O95832 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CLDN1O95832 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN1O95832 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN1O95832 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN1O95832 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN1O95832 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN1O95832 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN1O95832 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN1O95832 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLDN1O95832 AC008622.2-201ENST00000617006 1229 ntBASIC17.2■□□□□ 0.34
CLDN1O95832 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CLDN1O95832 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN1O95832 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN1O95832 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN1O95832 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN1O95832 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN1O95832 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN1O95832 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms