Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 CYP2D8P-201ENST00000433633 1490 ntBASIC20.3■□□□□ 0.84
BEST1O76090 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.3■□□□□ 0.84
BEST1O76090 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
BEST1O76090 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 AC097488.1-201ENST00000507834 756 ntBASIC20.3■□□□□ 0.84
BEST1O76090 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.3■□□□□ 0.84
BEST1O76090 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.3■□□□□ 0.84
BEST1O76090 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
BEST1O76090 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BEST1O76090 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
BEST1O76090 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
BEST1O76090 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 SLC25A24-204ENST00000569674 2357 ntBASIC20.29■□□□□ 0.84
BEST1O76090 AC007952.6-201ENST00000573168 2673 ntBASIC20.29■□□□□ 0.84
BEST1O76090 AC003957.1-201ENST00000625108 2673 ntBASIC20.29■□□□□ 0.84
BEST1O76090 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 FAM207BP-201ENST00000447172 505 ntBASIC20.29■□□□□ 0.84
BEST1O76090 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.29■□□□□ 0.84
BEST1O76090 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.29■□□□□ 0.84
BEST1O76090 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 DGCR10-201ENST00000609839 495 ntBASIC20.29■□□□□ 0.84
BEST1O76090 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
BEST1O76090 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BEST1O76090 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.29■□□□□ 0.84
BEST1O76090 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.29■□□□□ 0.84
BEST1O76090 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BEST1O76090 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
BEST1O76090 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.28■□□□□ 0.84
BEST1O76090 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
BEST1O76090 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
BEST1O76090 SLC25A1P4-201ENST00000567977 778 ntBASIC20.28■□□□□ 0.84
BEST1O76090 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.28■□□□□ 0.84
BEST1O76090 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST1O76090 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
BEST1O76090 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.28■□□□□ 0.84
BEST1O76090 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 CRYGFP-201ENST00000418459 633 ntBASIC20.27■□□□□ 0.84
BEST1O76090 ECEL1P3-201ENST00000427961 737 ntBASIC20.27■□□□□ 0.84
BEST1O76090 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.27■□□□□ 0.84
BEST1O76090 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 AC133561.5-201ENST00000635547 218 ntBASIC20.27■□□□□ 0.84
BEST1O76090 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
BEST1O76090 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST1O76090 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST1O76090 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BEST1O76090 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.83
BEST1O76090 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST1O76090 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.26■□□□□ 0.83
BEST1O76090 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms