Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.65■□□□□ 0.58
CDX4O14627 FEM1AP1-201ENST00000431297 1995 ntBASIC18.65■□□□□ 0.58
CDX4O14627 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDX4O14627 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDX4O14627 AL732292.2-201ENST00000609649 430 ntBASIC18.65■□□□□ 0.58
CDX4O14627 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.65■□□□□ 0.58
CDX4O14627 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.65■□□□□ 0.58
CDX4O14627 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.65■□□□□ 0.58
CDX4O14627 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDX4O14627 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDX4O14627 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDX4O14627 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDX4O14627 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
CDX4O14627 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.64■□□□□ 0.58
CDX4O14627 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDX4O14627 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.64■□□□□ 0.57
CDX4O14627 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDX4O14627 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.64■□□□□ 0.57
CDX4O14627 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.64■□□□□ 0.57
CDX4O14627 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 KRT8P26-201ENST00000534154 1276 ntBASIC18.64■□□□□ 0.57
CDX4O14627 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDX4O14627 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.64■□□□□ 0.57
CDX4O14627 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
CDX4O14627 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDX4O14627 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDX4O14627 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDX4O14627 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 AC079781.3-201ENST00000449110 356 ntBASIC18.63■□□□□ 0.57
CDX4O14627 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.63■□□□□ 0.57
CDX4O14627 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.63■□□□□ 0.57
CDX4O14627 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.63■□□□□ 0.57
CDX4O14627 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.63■□□□□ 0.57
CDX4O14627 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDX4O14627 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDX4O14627 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CDX4O14627 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.62■□□□□ 0.57
CDX4O14627 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.62■□□□□ 0.57
CDX4O14627 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CDX4O14627 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.62■□□□□ 0.57
CDX4O14627 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDX4O14627 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDX4O14627 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.61■□□□□ 0.57
CDX4O14627 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.61■□□□□ 0.57
CDX4O14627 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.61■□□□□ 0.57
CDX4O14627 AL162741.1-201ENST00000565563 1558 ntBASIC18.61■□□□□ 0.57
CDX4O14627 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDX4O14627 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDX4O14627 KRT18P1-202ENST00000452408 1331 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms