Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.9■□□□□ 0.62
EIF3FO00303 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.9■□□□□ 0.62
EIF3FO00303 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.9■□□□□ 0.62
EIF3FO00303 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
EIF3FO00303 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.9■□□□□ 0.62
EIF3FO00303 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.9■□□□□ 0.62
EIF3FO00303 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
EIF3FO00303 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EIF3FO00303 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
EIF3FO00303 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EIF3FO00303 TEX21P-204ENST00000641479 1693 ntBASIC18.89■□□□□ 0.61
EIF3FO00303 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
EIF3FO00303 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.89■□□□□ 0.61
EIF3FO00303 AL353807.1-201ENST00000427475 662 ntBASIC18.89■□□□□ 0.61
EIF3FO00303 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.89■□□□□ 0.61
EIF3FO00303 AL445675.2-201ENST00000620291 557 ntBASIC18.89■□□□□ 0.61
EIF3FO00303 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EIF3FO00303 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EIF3FO00303 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.89■□□□□ 0.61
EIF3FO00303 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EIF3FO00303 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
EIF3FO00303 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EIF3FO00303 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EIF3FO00303 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EIF3FO00303 TSPY21P-201ENST00000433481 731 ntBASIC18.88■□□□□ 0.61
EIF3FO00303 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 RPPH1-201ENST00000516869 333 ntBASIC18.88■□□□□ 0.61
EIF3FO00303 C1QBPP2-201ENST00000528754 825 ntBASIC18.88■□□□□ 0.61
EIF3FO00303 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.88■□□□□ 0.61
EIF3FO00303 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.88■□□□□ 0.61
EIF3FO00303 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EIF3FO00303 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.88■□□□□ 0.61
EIF3FO00303 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
EIF3FO00303 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EIF3FO00303 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EIF3FO00303 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EIF3FO00303 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EIF3FO00303 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
EIF3FO00303 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EIF3FO00303 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 NIFKP9-201ENST00000419265 221 ntBASIC18.87■□□□□ 0.61
EIF3FO00303 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
EIF3FO00303 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 AC018445.3-201ENST00000624177 1945 ntBASIC18.87■□□□□ 0.61
EIF3FO00303 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.87■□□□□ 0.61
EIF3FO00303 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EIF3FO00303 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EIF3FO00303 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EIF3FO00303 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EIF3FO00303 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EIF3FO00303 LINC01465-201ENST00000408887 1940 ntBASIC18.86■□□□□ 0.61
EIF3FO00303 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
EIF3FO00303 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
EIF3FO00303 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EIF3FO00303 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.86■□□□□ 0.61
EIF3FO00303 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EIF3FO00303 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EIF3FO00303 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms