Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AL136038.3-201ENST00000561909 1096 ntBASIC16.03■□□□□ 0.16
RNF223E7ERA6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 ZNF444P1-201ENST00000559497 298 ntBASIC16.02■□□□□ 0.16
RNF223E7ERA6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.02■□□□□ 0.16
RNF223E7ERA6 AC012313.10-201ENST00000623509 926 ntBASIC16.02■□□□□ 0.16
RNF223E7ERA6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNF223E7ERA6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RNF223E7ERA6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF223E7ERA6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF223E7ERA6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF223E7ERA6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.02■□□□□ 0.15
RNF223E7ERA6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.01■□□□□ 0.15
RNF223E7ERA6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF223E7ERA6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF223E7ERA6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16■□□□□ 0.15
RNF223E7ERA6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
RNF223E7ERA6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 KRT8P41-201ENST00000533985 1514 ntBASIC16■□□□□ 0.15
RNF223E7ERA6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16■□□□□ 0.15
RNF223E7ERA6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
RNF223E7ERA6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
RNF223E7ERA6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF223E7ERA6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF223E7ERA6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16■□□□□ 0.15
RNF223E7ERA6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16■□□□□ 0.15
RNF223E7ERA6 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms