Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL157384.1-201ENST00000445995 2473 ntBASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D3FA6NER0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 BX664615.1-201ENST00000443558 458 ntBASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 AC010653.2-201ENST00000623505 997 ntBASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TBC1D3FA6NER0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 AK4P3-201ENST00000418260 669 ntBASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 NTF6B-201ENST00000591913 560 ntBASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 AC006011.2-201ENST00000621313 1158 ntBASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
TBC1D3FA6NER0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 CKBP1-201ENST00000565489 1086 ntBASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 AC092338.2-201ENST00000568827 1415 ntBASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D3FA6NER0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 AC112907.3-201ENST00000577781 2400 ntBASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TBC1D3FA6NER0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms