Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 KRT18P5-201ENST00000436075 1291 ntBASIC20.84■□□□□ 0.93
CCDC66A2RUB6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC66A2RUB6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 AC016769.1-201ENST00000409132 1010 ntBASIC20.83■□□□□ 0.93
CCDC66A2RUB6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC66A2RUB6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 AP001271.2-201ENST00000624018 1556 ntBASIC20.83■□□□□ 0.92
CCDC66A2RUB6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC66A2RUB6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.82■□□□□ 0.92
CCDC66A2RUB6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 AC092666.2-201ENST00000613287 246 ntBASIC20.82■□□□□ 0.92
CCDC66A2RUB6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC66A2RUB6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 AC139713.2-201ENST00000641328 2723 ntBASIC20.81■□□□□ 0.92
CCDC66A2RUB6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 CYP2T3P-201ENST00000601990 817 ntBASIC20.81■□□□□ 0.92
CCDC66A2RUB6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC66A2RUB6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms