Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 AC133552.2-201ENST00000619106 1032 ntBASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 AL354751.1-201ENST00000412768 1863 ntBASIC13.53□□□□□ -0.24
TMEM238LA0A1B0GVL6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TMEM238LA0A1B0GVL6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 MIR6765-201ENST00000614092 87 ntBASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 CICP6-201ENST00000457191 2729 ntBASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM238LA0A1B0GVL6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC009831.1-201ENST00000580420 1582 ntBASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 BICD1-207ENST00000551848 1962 ntBASIC13.51□□□□□ -0.25
TMEM238LA0A1B0GVL6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms