Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.29□□□□□ -1.56
RIMBP3Q9UFD9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RIMBP3Q9UFD9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.29□□□□□ -1.56
RIMBP3Q9UFD9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIMBP3Q9UFD9 AL049780.3-201ENST00000624612 1583 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 Y_RNA.226-201ENST00000364337 114 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 RN7SKP56-201ENST00000410513 331 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AC117434.1-201ENST00000419971 836 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AC025754.2-201ENST00000606491 432 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AC243829.7-201ENST00000633081 225 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AL512643.1-201ENST00000635735 524 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 AC063923.1-201ENST00000478982 1619 ntBASIC5.28□□□□□ -1.56
RIMBP3Q9UFD9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AC019097.1-201ENST00000424783 735 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AC104687.1-201ENST00000485829 412 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 UBL5P2-201ENST00000583788 219 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 BNIP3P8-201ENST00000597863 560 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AC004832.5-201ENST00000608677 401 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AC100793.4-201ENST00000613683 429 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 AC097634.1-201ENST00000604491 2467 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RIMBP3Q9UFD9 NPM1P25-201ENST00000429734 854 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 RPS20P1-201ENST00000434853 354 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 ATP5C1P1-201ENST00000441945 895 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AC087888.1-201ENST00000550884 1254 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 OR5BR1P-201ENST00000524992 1330 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AL031736.2-201ENST00000426573 787 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 BTG4P1-201ENST00000510421 183 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 SUMO2P20-201ENST00000520803 283 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 AC112198.2-201ENST00000426589 6996 ntBASIC5.26□□□□□ -1.57
RIMBP3Q9UFD9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC007563.3-201ENST00000433233 371 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 RN7SL585P-201ENST00000470538 280 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 RN7SL594P-201ENST00000470590 287 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC068724.1-201ENST00000487100 792 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 ANXA2P1-201ENST00000505539 926 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC021146.3-201ENST00000511911 260 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC009812.2-201ENST00000517657 457 ntBASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIMBP3Q9UFD9 MUC2-202ENST00000613187 4845 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 RNU1-70P-201ENST00000362618 164 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 HLA-N-201ENST00000437516 135 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 NECAP1P2-201ENST00000455668 727 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC023598.1-201ENST00000472521 361 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 RPL23AP73-201ENST00000492507 471 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC026782.2-201ENST00000510845 636 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AL139174.1-201ENST00000531489 886 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC006518.1-201ENST00000541449 943 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC007619.2-201ENST00000605743 379 ntBASIC5.24□□□□□ -1.57
RIMBP3Q9UFD9 AC064859.1-201ENST00000624741 174 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms