Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 MIR3667-201ENST00000581025 74 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 KPNA2P3-201ENST00000584190 848 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 VN1R79P-201ENST00000593540 513 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 RPL26P30-202ENST00000602923 645 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 C8orf59P2-201ENST00000603441 271 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AL354760.1-201ENST00000608357 643 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AC104260.1-201ENST00000616660 539 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 uc_338.9-201ENST00000617424 182 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AL158209.2-201ENST00000619266 216 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AC012150.2-201ENST00000621300 544 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 AC010329.2-201ENST00000595195 2737 ntBASIC5.76□□□□□ -1.49
PDLIM7Q9NR12 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC107982.1-201ENST00000507171 1300 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RNU6-1066P-201ENST00000363573 105 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 Y_RNA.453-201ENST00000384223 109 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RNA5SP241-201ENST00000391326 114 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RPL23AP29-201ENST00000397284 453 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RNU6-248P-201ENST00000410720 107 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AL450992.3-201ENST00000413192 568 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AL121878.1-201ENST00000418638 859 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AIMP1P1-201ENST00000418670 937 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC007742.1-201ENST00000425789 329 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 MTND1P14-201ENST00000427400 950 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RPL19P16-201ENST00000433839 588 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ELOCP26-201ENST00000436067 329 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC092427.1-201ENST00000439177 601 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RPS29P10-201ENST00000439197 166 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 MTND4LP16-201ENST00000440828 295 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RAB11AP1-201ENST00000442978 646 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 GDI2P2-201ENST00000445131 608 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC013267.1-201ENST00000458227 267 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC010307.1-201ENST00000467206 836 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC112206.1-201ENST00000468416 477 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AL161747.1-201ENST00000480068 358 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 RPSAP51-201ENST00000497462 645 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC008628.2-201ENST00000502605 298 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC048346.1-201ENST00000510247 144 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC091133.4-201ENST00000511142 308 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC046134.1-201ENST00000514454 666 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC138832.1-201ENST00000522871 556 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC239860.2-201ENST00000525886 270 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 OR4A45P-201ENST00000529954 901 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC027369.5-201ENST00000533838 755 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 PARP1P2-201ENST00000556806 195 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC138915.2-201ENST00000569776 97 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC092954.2-201ENST00000609103 430 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC092650.2-201ENST00000619984 902 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AC124864.2-201ENST00000624736 186 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 AP005264.7-201ENST00000625003 745 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms