Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL139397.2-201ENST00000404529 772 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RPL5P18-201ENST00000406671 891 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RPS12P23-201ENST00000419579 400 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RBMY2FP-202ENST00000420346 1263 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RPSAP1-201ENST00000421328 880 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 CYCSP24-201ENST00000445119 316 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 PRDX3P3-201ENST00000447765 522 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RPL7P43-201ENST00000478876 753 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RPL38P3-201ENST00000484463 213 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 MLLT10P2-201ENST00000506434 249 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC008526.1-201ENST00000509149 338 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RNU2-69P-201ENST00000516061 100 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 TRMT10BP1-201ENST00000519377 943 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC006270.2-201ENST00000578523 652 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC069061.3-201ENST00000582254 823 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AL355802.3-201ENST00000607571 545 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AL109933.4-201ENST00000612111 157 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AL138960.1-201ENST00000613838 513 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC010378.1-201ENST00000619270 362 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AC034229.6-201ENST00000623704 224 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 AP000356.4-201ENST00000639500 172 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC024587.1-201ENST00000505925 2157 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC009812.4-201ENST00000569134 1805 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 LINC01109-201ENST00000603837 3081 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC011755.1-201ENST00000623763 2049 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RNU6-562P-201ENST00000362731 107 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RNA5SP378-201ENST00000363646 120 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 Y_RNA.445-201ENST00000384168 102 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 SUMO2P13-201ENST00000403109 272 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 PKMP3-201ENST00000405497 715 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 U3.31-201ENST00000408113 216 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RNU6-954P-201ENST00000411355 107 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 BCRP8-201ENST00000412037 255 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC073410.1-201ENST00000435125 589 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC128677.1-201ENST00000436016 442 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 TVP23CP1-201ENST00000450317 639 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC087385.2-201ENST00000477729 498 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RN7SL862P-201ENST00000491550 298 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC093815.1-201ENST00000508637 280 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RN7SKP14-201ENST00000516000 329 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RNU6-1069P-201ENST00000516612 133 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AP004371.1-201ENST00000525240 214 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AP004607.5-201ENST00000532034 217 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC005518.2-201ENST00000603254 282 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC022893.3-201ENST00000607665 437 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC012488.1-201ENST00000611221 640 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AL138726.1-201ENST00000614873 333 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC096861.1-201ENST00000616652 240 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 OR9K1P-202ENST00000641111 3217 ntBASIC8.29□□□□□ -1.08
RTN4Q9NQC3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.29□□□□□ -1.08
RTN4Q9NQC3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RTN4Q9NQC3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms