Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 MAPK10-263ENST00000641052 4307 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC117529.2-201ENST00000512159 2068 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RPL23P2-201ENST00000320371 421 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 SNORA51.1-201ENST00000363243 140 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP455-201ENST00000365190 119 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 SNORD116-4-201ENST00000384733 96 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 ZNF603P-201ENST00000405613 487 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AL023807.1-201ENST00000407932 359 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RN7SKP125-201ENST00000410481 302 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AL590609.2-201ENST00000421430 368 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RPL39P6-201ENST00000448289 150 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 TCEA1P1-201ENST00000449716 880 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC087879.1-201ENST00000474343 374 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC010424.1-201ENST00000506336 297 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC090071.1-201ENST00000507713 644 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC091965.2-201ENST00000512324 613 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 ZNF705CP-201ENST00000530515 889 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 RFPL1S-203ENST00000539579 330 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC103987.3-201ENST00000582071 292 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 EIF3FP1-201ENST00000613970 806 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC068722.2-201ENST00000618734 544 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AL356266.1-201ENST00000623311 483 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 AC092192.1-201ENST00000633154 1018 ntBASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM54Q9BYV2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RNU6-660P-201ENST00000364566 109 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RPS3AP9-201ENST00000417027 792 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC083875.1-201ENST00000419509 405 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 COX6CP2-201ENST00000444980 225 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 TRGVB-201ENST00000453257 471 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 APOOP2-201ENST00000461561 539 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC097493.1-201ENST00000463958 372 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC116337.2-201ENST00000477662 156 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RN7SL319P-201ENST00000480656 221 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC109462.1-201ENST00000491087 368 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC114981.1-201ENST00000503897 678 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC006499.5-201ENST00000505037 514 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC002456.2-201ENST00000509356 380 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 MTND3P5-201ENST00000512798 333 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP92-201ENST00000516437 110 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP34-201ENST00000516887 130 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC090022.1-201ENST00000546569 311 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms