Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-941P-201ENST00000516346 108 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 OR5AP1P-201ENST00000529730 940 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC087477.6-201ENST00000559595 843 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 MIR4637-201ENST00000582405 84 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC005498.1-201ENST00000592125 465 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC006116.3-201ENST00000592968 361 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC023509.5-201ENST00000617434 807 ntBASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNGAP1Q96PV0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
SYNGAP1Q96PV0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC006210.2-201ENST00000367074 1545 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC010928.1-201ENST00000592477 1447 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 FARSBP1-201ENST00000435808 1778 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 RNU1-149P-201ENST00000390870 161 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AL133388.1-201ENST00000404509 287 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 U3.36-201ENST00000408418 213 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC007390.1-201ENST00000415722 356 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 CACYBPP1-201ENST00000438592 684 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 TXNP5-201ENST00000441043 315 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 ATP5LP5-201ENST00000483050 299 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AL035404.1-201ENST00000497982 568 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 RNU6-583P-201ENST00000516012 92 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 RNU6-150P-201ENST00000516237 95 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 SCARNA16.4-201ENST00000516956 187 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 DEFB131D-201ENST00000526803 184 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 CYCSP2-201ENST00000558168 301 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC136624.4-201ENST00000573044 370 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC022916.3-201ENST00000592961 742 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC012507.3-201ENST00000603556 477 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC112187.2-201ENST00000604345 283 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AP004247.3-201ENST00000608682 624 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC019278.1-201ENST00000623516 479 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AP002799.1-201ENST00000623552 423 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNGAP1Q96PV0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC140134.1-201ENST00000511830 3544 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AL137058.3-201ENST00000624531 3099 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC114774.1-201ENST00000507410 1770 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 NAMPTP1-201ENST00000440465 2514 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.86-201ENST00000363020 111 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RNU1-43P-201ENST00000365052 165 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 SNORA16A-201ENST00000384342 137 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms