Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 UBE3AP2-201ENST00000429033 2259 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC022031.1-201ENST00000585985 2593 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 OR4K15-201ENST00000305051 1216 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RNU6-1293P-201ENST00000384077 107 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 MIR525-201ENST00000384978 85 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RPL23AP59-201ENST00000399415 461 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 MFSD13B-201ENST00000420133 1290 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AL356387.2-201ENST00000422272 243 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 IFNNP1-201ENST00000429219 553 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC009263.1-201ENST00000441193 1239 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 HMGN2P21-201ENST00000447764 270 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RPL23AP15-201ENST00000450202 459 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RPL37P6-202ENST00000464216 403 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC109327.1-201ENST00000471666 403 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RN7SL629P-201ENST00000489622 285 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 TPT1P3-201ENST00000492841 512 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC022968.1-201ENST00000567372 442 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC124283.4-201ENST00000581815 456 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC007448.1-201ENST00000582714 234 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC006116.7-201ENST00000590141 756 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC068620.3-201ENST00000602749 560 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AL034351.1-201ENST00000605288 668 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 RNU6-156P-201ENST00000621869 107 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AL445363.3-201ENST00000623080 671 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC006065.5-201ENST00000623427 349 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC71LQ8N9Z2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 ZNF33CP-201ENST00000432492 2030 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 MIR423-201ENST00000362201 94 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 SNORA60-201ENST00000362396 134 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 SNORD65C-201ENST00000390962 71 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 HMGN2P8-201ENST00000391458 268 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 AL583835.1-201ENST00000399570 407 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 PRRC2CP1-201ENST00000404428 159 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 HSPE1P26-201ENST00000405341 275 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 Z98941.1-201ENST00000407764 100 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 SNORA11C-201ENST00000408532 129 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 BRWD1P3-201ENST00000428816 390 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 CYCSP43-201ENST00000438233 310 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 HSFY3P-201ENST00000444242 1191 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 HMGB1P48-201ENST00000446155 598 ntBASIC3.36□□□□□ -1.87
CCDC71LQ8N9Z2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms