Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCUBE3Q8IX30 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.222-201ENST00000364264 102 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.478-201ENST00000384358 107 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.562-201ENST00000384695 113 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.594-201ENST00000410373 140 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 RN7SKP188-201ENST00000410789 317 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC073910.1-201ENST00000445047 438 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 RPL23AP64-201ENST00000469465 435 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 OR52K3P-201ENST00000531655 943 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC024224.1-201ENST00000538284 609 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MIR4732-201ENST00000581873 76 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MTND4LP5-201ENST00000605152 292 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AL390877.1-201ENST00000605704 214 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AL512329.2-201ENST00000607350 548 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC103705.1-201ENST00000619013 241 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MIR7854-201ENST00000620068 65 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AP001264.1-201ENST00000620602 703 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 AC011155.2-201ENST00000623202 216 ntBASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SCUBE3Q8IX30 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 TNPO1P2-201ENST00000426249 2665 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.39-201ENST00000362620 98 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RNU1-85P-201ENST00000364127 164 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.483-201ENST00000384380 101 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RNU1-46P-201ENST00000384425 164 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC016769.3-201ENST00000396562 315 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL078604.1-201ENST00000404609 466 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL359092.1-201ENST00000417156 265 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC079922.1-201ENST00000443291 359 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC005297.2-201ENST00000450430 606 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC011225.1-201ENST00000457751 369 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RPL7P5-201ENST00000471472 736 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC103987.1-201ENST00000473394 348 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 EIF3KP3-201ENST00000514461 639 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RNU6-189P-201ENST00000516120 101 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RNU1-54P-201ENST00000517181 120 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 HSBP1P1-201ENST00000555205 166 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC090651.1-201ENST00000567865 634 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC060771.1-201ENST00000582031 164 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AP001486.3-201ENST00000615334 372 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms