Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RNA5SP424-201ENST00000390988 115 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 RNA5SP105-201ENST00000391123 113 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 RNU6ATAC-201ENST00000408749 126 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 RNU6-233P-201ENST00000410845 141 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 VN1R31P-201ENST00000417498 730 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 MRPS18BP2-201ENST00000434310 759 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC074367.1-201ENST00000438685 1125 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 RPS4XP2-201ENST00000458402 793 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 SNORD108-201ENST00000459332 71 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 RPL23AP44-201ENST00000482216 473 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC093853.1-201ENST00000515689 483 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC023632.4-201ENST00000517783 191 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 AC138915.3-201ENST00000562908 1389 ntBASIC3.22□□□□□ -1.89
LRRC28Q86X40 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRC28Q86X40 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRC28Q86X40 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.21□□□□□ -1.89
LRRC28Q86X40 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.89
LRRC28Q86X40 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.89
LRRC28Q86X40 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC28Q86X40 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC28Q86X40 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 RN7SKP27-201ENST00000410684 333 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RPS7P13-201ENST00000413955 498 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RPS3AP46-201ENST00000448352 682 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RPL12P26-201ENST00000452430 487 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RN7SL542P-201ENST00000467147 294 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 AL133372.1-201ENST00000493565 745 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 MTCO1P30-201ENST00000515244 580 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU6-347P-201ENST00000516658 105 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU6-352P-201ENST00000516908 107 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 RNU1-45P-201ENST00000517191 141 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 BNIP3P38-201ENST00000601117 544 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 ABI1P1-201ENST00000603375 1120 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 AC112230.1-201ENST00000604342 547 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 AP003072.5-201ENST00000623872 773 ntBASIC3.21□□□□□ -1.9
LRRC28Q86X40 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
LRRC28Q86X40 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRRC28Q86X40 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC119744.1-201ENST00000454746 1715 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC28Q86X40 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 MIR92A2-201ENST00000385299 75 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 SNORA11-201ENST00000408789 128 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC098592.2-201ENST00000413158 265 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 SMC4P1-201ENST00000414479 527 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 MTND2P15-201ENST00000418575 892 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AL390879.2-203ENST00000426943 1121 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AL591419.1-201ENST00000427423 339 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 Z74696.2-201ENST00000436514 498 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 NOTCH2P1-201ENST00000443481 624 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC239367.2-201ENST00000447309 705 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 HMGB3P30-201ENST00000457863 606 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 SCARNA14-201ENST00000516903 136 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 RN7SKP289-201ENST00000517244 295 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 PAICSP4-201ENST00000517543 1253 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms