Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 S100A11P1-201ENST00000477525 312 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 SETP12-201ENST00000514068 805 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 HMGB1P6-201ENST00000569046 646 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 MIR4425-201ENST00000580572 84 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AL139395.1-201ENST00000603662 160 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 AL096803.3-201ENST00000609032 532 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 CYCSP41-201ENST00000616920 296 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 Z83843.1-201ENST00000604070 3685 ntBASIC2.28□□□□□ -2.04
CSMD3Q7Z407 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CSMD3Q7Z407 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 SNORA18.3-201ENST00000384122 132 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 RPL7P12-201ENST00000446719 750 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 AL035404.1-201ENST00000497982 568 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 MTND6P33-201ENST00000571794 183 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 AC020914.4-201ENST00000597690 277 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 AC005261.6-201ENST00000623072 1387 ntBASIC2.28□□□□□ -2.05
CSMD3Q7Z407 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CSMD3Q7Z407 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 RNU4-47P-201ENST00000410876 114 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL513477.1-202ENST00000417061 214 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 TPTE2P3-201ENST00000441562 1189 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC117440.1-201ENST00000474107 571 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 H3F3AP1-201ENST00000559984 334 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC005242.1-201ENST00000585658 438 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC006363.1-201ENST00000603806 463 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 RPL6P21-201ENST00000418672 846 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 HIGD1AP12-201ENST00000427832 281 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 PPBPP1-201ENST00000510807 373 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 snoU109.6-201ENST00000516831 118 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC022080.3-201ENST00000544433 482 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL591424.2-201ENST00000617023 128 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 MAPK10-286ENST00000641208 8747 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 IPO8P1-201ENST00000455509 3109 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 MTND4P22-201ENST00000413116 1169 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL139281.1-201ENST00000422120 335 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 RPL21P40-201ENST00000428586 483 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AL356535.1-201ENST00000440335 398 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC093156.1-201ENST00000440382 670 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 TXNP1-201ENST00000441872 371 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC084357.1-201ENST00000473404 255 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 FCF1P3-201ENST00000496394 590 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 HMGB1P3-201ENST00000502802 616 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC026782.2-201ENST00000510845 636 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 AC064859.1-201ENST00000624741 174 ntBASIC2.27□□□□□ -2.05
CSMD3Q7Z407 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms