Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC062016.2-201ENST00000420950 676 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 EIF4EP1-201ENST00000422311 642 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 PDSS1P1-201ENST00000422953 1114 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC008072.1-201ENST00000434254 824 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC104073.1-201ENST00000451988 151 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.79□□□□□ -1.8
CX3CL1P78423 HIGD1AP8-201ENST00000453927 274 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC093270.2-201ENST00000486157 792 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 RPL7P38-201ENST00000488396 739 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 NDUFA5P12-201ENST00000503796 343 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 RNU1-6P-201ENST00000516290 144 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AF186190.1-201ENST00000517470 480 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 ZNF705CP-201ENST00000530515 889 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 LSM6P2-201ENST00000552208 177 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC051619.2-201ENST00000559063 397 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC079075.1-201ENST00000559543 878 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 OR1F2P-201ENST00000570470 933 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 MIR4458-201ENST00000578872 75 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 MIR5699-201ENST00000578903 90 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 MIR3934-201ENST00000579806 107 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC068313.1-201ENST00000604028 1008 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC069304.2-201ENST00000605154 435 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC087385.3-201ENST00000620477 187 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC131159.1-201ENST00000621854 213 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC067852.7-201ENST00000623270 535 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC055839.1-201ENST00000634467 498 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AL139811.1-201ENST00000424779 2299 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.79□□□□□ -1.8
CX3CL1P78423 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CX3CL1P78423 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CX3CL1P78423 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.78□□□□□ -1.8
CX3CL1P78423 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 RNU1-20P-201ENST00000363314 162 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.78□□□□□ -1.8
CX3CL1P78423 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AL121834.1-202ENST00000404494 277 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 RAP1BP1-201ENST00000412709 553 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AL133384.1-201ENST00000412744 351 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AL645608.4-201ENST00000423619 154 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 OR2B7P-201ENST00000429302 934 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 RPS25P9-201ENST00000435591 252 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 RPL12P3-201ENST00000440080 396 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 MTND2P20-201ENST00000440805 661 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC073648.4-201ENST00000442655 781 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 TRBV26-201ENST00000456572 344 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 RPS3AP41-201ENST00000462701 778 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC063943.1-201ENST00000465434 453 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 AC092757.1-201ENST00000467293 467 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CX3CL1P78423 RN7SL41P-201ENST00000476144 297 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CL1P78423 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AP000563.1-201ENST00000490865 758 ntBASIC3.78□□□□□ -1.8
CX3CL1P78423 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.78□□□□□ -1.8
CX3CL1P78423 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms