Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC019178.2-201ENST00000423595 505 ntBASIC4.89□□□□□ -1.63
COPB1P53618 RPS12P10-201ENST00000427031 377 ntBASIC4.89□□□□□ -1.63
COPB1P53618 DYNLL1P7-201ENST00000429273 258 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.89□□□□□ -1.63
COPB1P53618 ATP5F1P1-201ENST00000433775 569 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 MTND3P1-201ENST00000441336 220 ntBASIC4.89□□□□□ -1.63
COPB1P53618 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.89□□□□□ -1.63
COPB1P53618 AC079804.1-201ENST00000461922 436 ntBASIC4.89□□□□□ -1.63
COPB1P53618 TRBV8-2-201ENST00000475637 270 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AC105185.1-201ENST00000518705 535 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 OR5M2P-201ENST00000529003 936 ntBASIC4.89□□□□□ -1.63
COPB1P53618 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.89□□□□□ -1.63
COPB1P53618 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPB1P53618 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.89□□□□□ -1.63
COPB1P53618 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.89□□□□□ -1.63
COPB1P53618 ELOCP28-201ENST00000590044 317 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL133338.2-201ENST00000604292 736 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AC010738.1-201ENST00000604970 987 ntBASIC4.89□□□□□ -1.63
COPB1P53618 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.89□□□□□ -1.63
COPB1P53618 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 AC090246.1-201ENST00000616499 426 ntBASIC4.89□□□□□ -1.63
COPB1P53618 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.89□□□□□ -1.63
COPB1P53618 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPB1P53618 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COPB1P53618 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPB1P53618 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPB1P53618 DDX43P2-201ENST00000604753 1354 ntBASIC4.89□□□□□ -1.63
COPB1P53618 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPB1P53618 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.88□□□□□ -1.63
COPB1P53618 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 AL391994.1-201ENST00000254724 282 ntBASIC4.88□□□□□ -1.63
COPB1P53618 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 IGKV7-3-201ENST00000357453 298 ntBASIC4.88□□□□□ -1.63
COPB1P53618 MIR141-201ENST00000384975 95 ntBASIC4.88□□□□□ -1.63
COPB1P53618 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COPB1P53618 CYB5AP4-201ENST00000396692 399 ntBASIC4.88□□□□□ -1.63
COPB1P53618 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
COPB1P53618 RNA5SP80-201ENST00000410475 111 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 TIMM9P2-201ENST00000419324 266 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AL035407.1-201ENST00000429211 571 ntBASIC4.88□□□□□ -1.63
COPB1P53618 MTCO1P54-201ENST00000430139 712 ntBASIC4.88□□□□□ -1.63
COPB1P53618 USP9YP31-201ENST00000431405 881 ntBASIC4.88□□□□□ -1.63
COPB1P53618 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.88□□□□□ -1.63
COPB1P53618 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 USP9YP28-201ENST00000435142 589 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AL354941.1-201ENST00000438600 464 ntBASIC4.88□□□□□ -1.63
COPB1P53618 ELOCP8-201ENST00000439309 332 ntBASIC4.88□□□□□ -1.63
COPB1P53618 ELOCP15-201ENST00000442090 332 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC009220.1-201ENST00000451614 275 ntBASIC4.88□□□□□ -1.63
COPB1P53618 VN1R32P-201ENST00000452234 905 ntBASIC4.88□□□□□ -1.63
COPB1P53618 BX248409.1-201ENST00000455497 255 ntBASIC4.88□□□□□ -1.63
COPB1P53618 MTCO2P18-201ENST00000457151 658 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 RNU7-27P-201ENST00000459281 62 ntBASIC4.88□□□□□ -1.63
COPB1P53618 RPL7AP28-201ENST00000464513 571 ntBASIC4.88□□□□□ -1.63
COPB1P53618 SYPL1P1-201ENST00000473622 768 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.88□□□□□ -1.63
COPB1P53618 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 AL035404.1-201ENST00000497982 568 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.88□□□□□ -1.63
COPB1P53618 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.88□□□□□ -1.63
COPB1P53618 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.88□□□□□ -1.63
COPB1P53618 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
COPB1P53618 AC137768.1-201ENST00000549998 553 ntBASIC4.88□□□□□ -1.63
COPB1P53618 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 AC024909.2-201ENST00000553035 286 ntBASIC4.88□□□□□ -1.63
COPB1P53618 HIGD1AP17-201ENST00000554576 276 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 MIR4737-201ENST00000583979 81 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.88□□□□□ -1.63
COPB1P53618 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 AL163642.2-201ENST00000604722 1019 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AL451074.6-201ENST00000608512 729 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AC013562.2-201ENST00000611632 603 ntBASIC4.88□□□□□ -1.63
COPB1P53618 AL731566.2-201ENST00000618971 317 ntBASIC4.88□□□□□ -1.63
COPB1P53618 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms