Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.13□□□□□ -1.75
SSR1P43307 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.13□□□□□ -1.75
SSR1P43307 RPL32P3-201ENST00000359025 275 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AC016397.1-201ENST00000412463 242 ntBASIC4.13□□□□□ -1.75
SSR1P43307 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.13□□□□□ -1.75
SSR1P43307 MTND2P15-201ENST00000418575 892 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.13□□□□□ -1.75
SSR1P43307 AC016712.1-201ENST00000431088 378 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.13□□□□□ -1.75
SSR1P43307 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 RPL37P6-202ENST00000464216 403 ntBASIC4.13□□□□□ -1.75
SSR1P43307 RNU6-889P-201ENST00000517189 103 ntBASIC4.13□□□□□ -1.75
SSR1P43307 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.13□□□□□ -1.75
SSR1P43307 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 HAUS1P3-201ENST00000523909 662 ntBASIC4.13□□□□□ -1.75
SSR1P43307 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.13□□□□□ -1.75
SSR1P43307 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.13□□□□□ -1.75
SSR1P43307 AL133247.2-201ENST00000603236 482 ntBASIC4.13□□□□□ -1.75
SSR1P43307 RNU4-89P-201ENST00000607443 133 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AC022079.2-201ENST00000619739 566 ntBASIC4.13□□□□□ -1.75
SSR1P43307 MIR6758-201ENST00000620653 63 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AC090506.2-201ENST00000624521 419 ntBASIC4.13□□□□□ -1.75
SSR1P43307 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.13□□□□□ -1.75
SSR1P43307 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 UBE3AP2-201ENST00000429033 2259 ntBASIC4.12□□□□□ -1.75
SSR1P43307 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSR1P43307 MTND5P3-201ENST00000438536 1800 ntBASIC4.12□□□□□ -1.75
SSR1P43307 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SSR1P43307 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
SSR1P43307 SNORA56-201ENST00000383966 129 ntBASIC4.12□□□□□ -1.75
SSR1P43307 MIR607-201ENST00000385241 96 ntBASIC4.12□□□□□ -1.75
SSR1P43307 RPS26P8-201ENST00000393490 348 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AC016769.2-201ENST00000414815 475 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AL356276.2-201ENST00000435919 558 ntBASIC4.12□□□□□ -1.75
SSR1P43307 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
SSR1P43307 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.12□□□□□ -1.75
SSR1P43307 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.12□□□□□ -1.75
SSR1P43307 ARPC3P2-201ENST00000457786 533 ntBASIC4.12□□□□□ -1.75
SSR1P43307 NDUFA5P9-201ENST00000472609 340 ntBASIC4.12□□□□□ -1.75
SSR1P43307 RPS27AP1-201ENST00000475545 471 ntBASIC4.12□□□□□ -1.75
SSR1P43307 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.12□□□□□ -1.75
SSR1P43307 AC093770.1-201ENST00000511559 571 ntBASIC4.12□□□□□ -1.75
SSR1P43307 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.12□□□□□ -1.75
SSR1P43307 RNU6-1004P-201ENST00000516584 111 ntBASIC4.12□□□□□ -1.75
SSR1P43307 RN7SKP234-201ENST00000517173 224 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.12□□□□□ -1.75
SSR1P43307 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
SSR1P43307 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSR1P43307 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SSR1P43307 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.12□□□□□ -1.75
SSR1P43307 AP004372.1-201ENST00000604842 844 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AC005962.2-201ENST00000611427 652 ntBASIC4.12□□□□□ -1.75
SSR1P43307 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSR1P43307 CASC19-261ENST00000641853 1638 ntBASIC4.12□□□□□ -1.75
SSR1P43307 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
SSR1P43307 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSR1P43307 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.11□□□□□ -1.75
SSR1P43307 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
SSR1P43307 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSR1P43307 AL121657.1-201ENST00000327215 531 ntBASIC4.11□□□□□ -1.75
SSR1P43307 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSR1P43307 AC083799.1-201ENST00000366451 910 ntBASIC4.11□□□□□ -1.75
SSR1P43307 RNU6-40P-201ENST00000384254 107 ntBASIC4.11□□□□□ -1.75
SSR1P43307 SNORA70E-201ENST00000384492 135 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.11□□□□□ -1.75
SSR1P43307 LINC01881-201ENST00000416103 412 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 NPM1P34-201ENST00000428821 893 ntBASIC4.11□□□□□ -1.75
SSR1P43307 MTCO1P57-201ENST00000432182 261 ntBASIC4.11□□□□□ -1.75
SSR1P43307 HMGB1P45-201ENST00000435986 653 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 AC092185.1-201ENST00000491371 97 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 MTND4LP22-201ENST00000508209 276 ntBASIC4.11□□□□□ -1.75
SSR1P43307 RNU4-60P-201ENST00000517239 135 ntBASIC4.11□□□□□ -1.75
SSR1P43307 HMGB1P46-201ENST00000520062 610 ntBASIC4.11□□□□□ -1.75
SSR1P43307 IGKV2D-10-201ENST00000520194 281 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.11□□□□□ -1.75
SSR1P43307 AC022784.5-201ENST00000522241 437 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.11□□□□□ -1.75
SSR1P43307 MTCO1P49-201ENST00000523429 802 ntBASIC4.11□□□□□ -1.75
SSR1P43307 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.11□□□□□ -1.75
SSR1P43307 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.11□□□□□ -1.75
SSR1P43307 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.11□□□□□ -1.75
SSR1P43307 AC005951.1-201ENST00000576706 485 ntBASIC4.11□□□□□ -1.75
SSR1P43307 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms