Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
RFC3P40938 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.56□□□□□ -1.84
RFC3P40938 AC138393.1-206ENST00000540997 1886 ntBASIC3.56□□□□□ -1.84
RFC3P40938 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RFC3P40938 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFC3P40938 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.56□□□□□ -1.84
RFC3P40938 SNORA27.3-201ENST00000364937 134 ntBASIC3.56□□□□□ -1.84
RFC3P40938 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 MIR200C-201ENST00000384980 68 ntBASIC3.56□□□□□ -1.84
RFC3P40938 Z86062.1-201ENST00000406773 777 ntBASIC3.56□□□□□ -1.84
RFC3P40938 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
RFC3P40938 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
RFC3P40938 RPL7AP73-201ENST00000413490 353 ntBASIC3.56□□□□□ -1.84
RFC3P40938 LINC01881-201ENST00000416103 412 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFC3P40938 AC069157.1-201ENST00000421749 137 ntBASIC3.56□□□□□ -1.84
RFC3P40938 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.56□□□□□ -1.84
RFC3P40938 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RFC3P40938 VN1R34P-201ENST00000447387 883 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.56□□□□□ -1.84
RFC3P40938 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.56□□□□□ -1.84
RFC3P40938 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RFC3P40938 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.56□□□□□ -1.84
RFC3P40938 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 AL121594.4-201ENST00000556211 1196 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AC007599.1-201ENST00000568688 1174 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.56□□□□□ -1.84
RFC3P40938 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.56□□□□□ -1.84
RFC3P40938 AP001180.3-201ENST00000582221 145 ntBASIC3.56□□□□□ -1.84
RFC3P40938 AC104662.1-201ENST00000604448 511 ntBASIC3.56□□□□□ -1.84
RFC3P40938 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFC3P40938 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RFC3P40938 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.56□□□□□ -1.84
RFC3P40938 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RFC3P40938 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFC3P40938 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFC3P40938 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFC3P40938 DCAF13P3-201ENST00000561147 1334 ntBASIC3.55□□□□□ -1.84
RFC3P40938 BDP1P-201ENST00000582658 1990 ntBASIC3.55□□□□□ -1.84
RFC3P40938 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFC3P40938 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFC3P40938 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.55□□□□□ -1.84
RFC3P40938 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFC3P40938 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
RFC3P40938 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFC3P40938 NOTCH2P1-201ENST00000443481 624 ntBASIC3.55□□□□□ -1.84
RFC3P40938 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.55□□□□□ -1.84
RFC3P40938 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 CYCSP53-201ENST00000455540 265 ntBASIC3.55□□□□□ -1.84
RFC3P40938 RPL37P3-201ENST00000456825 293 ntBASIC3.55□□□□□ -1.84
RFC3P40938 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
RFC3P40938 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 IGKV2-36-201ENST00000519999 223 ntBASIC3.55□□□□□ -1.84
RFC3P40938 HMGB1P46-201ENST00000520062 610 ntBASIC3.55□□□□□ -1.84
RFC3P40938 CYCSP30-201ENST00000546447 172 ntBASIC3.55□□□□□ -1.84
RFC3P40938 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.55□□□□□ -1.84
RFC3P40938 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.55□□□□□ -1.84
RFC3P40938 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.55□□□□□ -1.84
RFC3P40938 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
RFC3P40938 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.55□□□□□ -1.84
RFC3P40938 AC083899.3-201ENST00000603413 594 ntBASIC3.55□□□□□ -1.84
RFC3P40938 AL139089.1-201ENST00000620372 975 ntBASIC3.55□□□□□ -1.84
RFC3P40938 AC244205.2-202ENST00000635781 342 ntBASIC3.55□□□□□ -1.84
RFC3P40938 AL773545.4-201ENST00000637262 310 ntBASIC3.55□□□□□ -1.84
RFC3P40938 AL513478.4-201ENST00000641636 310 ntBASIC3.55□□□□□ -1.84
RFC3P40938 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.55□□□□□ -1.84
RFC3P40938 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
RFC3P40938 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
RFC3P40938 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.55□□□□□ -1.84
RFC3P40938 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.55□□□□□ -1.84
RFC3P40938 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
RFC3P40938 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
RFC3P40938 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.54□□□□□ -1.84
RFC3P40938 ZNF285B-201ENST00000561698 1767 ntBASIC3.54□□□□□ -1.84
RFC3P40938 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RFC3P40938 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.54□□□□□ -1.84
RFC3P40938 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 SNORD3H-201ENST00000384486 214 ntBASIC3.54□□□□□ -1.84
RFC3P40938 U8.11-201ENST00000384699 133 ntBASIC3.54□□□□□ -1.84
RFC3P40938 U8.12-201ENST00000384701 133 ntBASIC3.54□□□□□ -1.84
RFC3P40938 CCNB2P1-201ENST00000399411 1150 ntBASIC3.54□□□□□ -1.84
RFC3P40938 SNORA3C-201ENST00000408792 125 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms