Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC110760.3-201ENST00000598794 467 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 AP003117.2-201ENST00000606010 545 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 AL392048.1-201ENST00000613946 534 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 AL049794.2-201ENST00000616301 365 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 AC090246.1-201ENST00000616499 426 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD12P35452 MIR6830-201ENST00000636015 70 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD12P35452 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD12P35452 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD12P35452 AL592148.3-201ENST00000608771 2646 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXD12P35452 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD12P35452 OR56B2P-202ENST00000641377 2453 ntBASIC4.83□□□□□ -1.64
HOXD12P35452 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 AL590240.1-201ENST00000334118 313 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 RNU5A-2P-201ENST00000384337 116 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 ATP5F1P3-201ENST00000397213 657 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 RSL24D1P4-201ENST00000400938 484 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 PAICSP7-201ENST00000419829 962 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC007435.1-201ENST00000421086 415 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 CHIAP3-201ENST00000423668 1133 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXD12P35452 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 VN1R108P-201ENST00000431580 830 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC005345.1-201ENST00000431868 217 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXD12P35452 ARL2BPP10-201ENST00000446487 531 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC090804.1-201ENST00000448870 490 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 AL445433.1-201ENST00000457507 257 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 RNU7-125P-201ENST00000458760 62 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC015724.1-201ENST00000478577 156 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 OR4C2P-201ENST00000530855 1064 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AP000619.3-201ENST00000535634 1127 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC124068.1-201ENST00000563131 678 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD12P35452 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 BNIP3P26-201ENST00000600827 554 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC011453.2-201ENST00000603737 729 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC010424.2-201ENST00000607594 443 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 AC105429.2-201ENST00000610567 517 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 FAM27B-201ENST00000610601 213 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 MIR6716-201ENST00000613413 80 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 FAM157B-203ENST00000639350 358 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 MAPK10-286ENST00000641208 8747 ntBASIC4.82□□□□□ -1.64
HOXD12P35452 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXD12P35452 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD12P35452 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
HOXD12P35452 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD12P35452 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 AC108751.5-201ENST00000492880 1336 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD12P35452 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXD12P35452 FAM3C2-201ENST00000312214 681 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 OR1L6-202ENST00000373684 1044 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC016907.1-201ENST00000419483 435 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 RPL31P45-201ENST00000419532 356 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 RPL17P36-201ENST00000420302 549 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AL365203.2-201ENST00000423444 196 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC234779.1-201ENST00000425910 285 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 ATP5F1P1-201ENST00000433775 569 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AL445567.1-201ENST00000439121 144 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXD12P35452 MTND3P1-201ENST00000441336 220 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms