Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLIP1P30622 AC017071.1-201ENST00000564407 2204 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLIP1P30622 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.25□□□□□ -1.57
CLIP1P30622 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP1P30622 MTCO1P7-201ENST00000419523 1542 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLIP1P30622 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP1P30622 AL158071.1-201ENST00000430315 461 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 OR6C71P-201ENST00000432580 913 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 AC006028.1-201ENST00000438379 402 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 RPL23AP67-201ENST00000465341 474 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 TRBV8-2-201ENST00000475637 270 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP1P30622 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.24□□□□□ -1.57
CLIP1P30622 MIR2276-201ENST00000516886 89 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
CLIP1P30622 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.24□□□□□ -1.57
CLIP1P30622 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP1P30622 HIGD1AP1-201ENST00000550979 275 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP1P30622 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.24□□□□□ -1.57
CLIP1P30622 MIR2682-201ENST00000580305 110 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 AC100793.4-201ENST00000613683 429 ntBASIC5.24□□□□□ -1.57
CLIP1P30622 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLIP1P30622 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP1P30622 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP1P30622 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP1P30622 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP1P30622 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP1P30622 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CLIP1P30622 OR10J6P-201ENST00000289731 930 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP1P30622 AC012065.2-201ENST00000421295 375 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AL513174.1-201ENST00000423182 629 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AP001486.1-201ENST00000463339 476 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP1P30622 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.23□□□□□ -1.57
CLIP1P30622 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP1P30622 AC084036.1-201ENST00000609190 508 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AL356321.1-201ENST00000621360 228 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CLIP1P30622 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLIP1P30622 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP1P30622 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP1P30622 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP1P30622 AP002088.1-201ENST00000382740 395 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLIP1P30622 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP1P30622 NANOGNBP1-201ENST00000448444 480 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP1P30622 RNA5SP341-201ENST00000516261 117 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 Vault.1-201ENST00000516474 102 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP1P30622 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP1P30622 AL162713.1-201ENST00000604480 262 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AC105227.2-201ENST00000615075 605 ntBASIC5.23□□□□□ -1.57
CLIP1P30622 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP1P30622 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP1P30622 AC007529.1-201ENST00000418574 2178 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP1P30622 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.22□□□□□ -1.57
CLIP1P30622 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP1P30622 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLIP1P30622 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP1P30622 GCNT6-201ENST00000379591 934 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AL136131.1-201ENST00000406079 803 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 RNU4-47P-201ENST00000410876 114 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AL024507.1-201ENST00000412741 274 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AL356968.1-201ENST00000416622 474 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 RPL7P47-201ENST00000497299 556 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AC097462.2-201ENST00000504623 481 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP1P30622 SCARNA20.6-201ENST00000517251 106 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.22□□□□□ -1.57
CLIP1P30622 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP1P30622 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP1P30622 AL121594.4-201ENST00000556211 1196 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.22□□□□□ -1.57
CLIP1P30622 AC006539.2-201ENST00000601729 572 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 AL157817.1-201ENST00000614264 790 ntBASIC5.22□□□□□ -1.57
CLIP1P30622 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CLIP1P30622 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLIP1P30622 MIR30E-201ENST00000362104 92 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 AL353678.1-201ENST00000422735 741 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP1P30622 AL831737.1-201ENST00000441288 271 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP1P30622 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP1P30622 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP1P30622 OR10D4P-201ENST00000525892 951 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP1P30622 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP1P30622 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP1P30622 RNVU1-4-201ENST00000612985 164 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 AL162274.2-201ENST00000614406 332 ntBASIC5.21□□□□□ -1.58
CLIP1P30622 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLIP1P30622 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP1P30622 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms