Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 E2F6P2-201ENST00000420708 748 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 EIF4HP2-201ENST00000424380 563 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 USP9YP9-201ENST00000429406 715 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 CKS1BP5-201ENST00000434172 273 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 MTCO2P20-201ENST00000437339 673 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AC005154.2-201ENST00000438110 379 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AC092427.1-201ENST00000439177 601 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC073587.1-201ENST00000447093 876 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC005798.1-201ENST00000513715 387 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.39□□□□□ -1.71
ABCD3P28288 AC008536.1-201ENST00000602872 669 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AL592221.1-201ENST00000605266 382 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AP000484.1-201ENST00000620067 1252 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AC009318.4-201ENST00000620496 486 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 GDI2P1-201ENST00000429312 1336 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 AL359893.1-201ENST00000447628 1580 ntBASIC4.39□□□□□ -1.71
ABCD3P28288 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ABCD3P28288 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.39□□□□□ -1.71
ABCD3P28288 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ABCD3P28288 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ABCD3P28288 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 MTND5P3-201ENST00000438536 1800 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCD3P28288 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ABCD3P28288 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCD3P28288 RNU6-157P-201ENST00000383957 107 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AL355379.1-201ENST00000405542 640 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 MTCYBP24-201ENST00000420387 1106 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC010099.3-201ENST00000423896 409 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 CKS1BP6-201ENST00000424932 240 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.38□□□□□ -1.71
ABCD3P28288 RPS27AP12-201ENST00000429552 465 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 SNORD108-201ENST00000459332 71 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC011005.3-201ENST00000491624 395 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ABCD3P28288 AC098862.1-201ENST00000504991 413 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.38□□□□□ -1.71
ABCD3P28288 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.38□□□□□ -1.71
ABCD3P28288 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 SNORA3.4-201ENST00000515969 96 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 RNA5SP360-201ENST00000516555 118 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 RNU4-60P-201ENST00000517239 135 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.38□□□□□ -1.71
ABCD3P28288 LRRC34P1-201ENST00000542742 915 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 OR6C73P-201ENST00000546432 358 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC087477.6-201ENST00000559595 843 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 BNIP3P24-201ENST00000593398 557 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AL355812.1-201ENST00000603215 216 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 DPRXP5-201ENST00000604662 539 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 OR6R2P-201ENST00000609216 300 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC009464.1-201ENST00000615731 469 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC090246.1-201ENST00000616499 426 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC008147.4-201ENST00000617570 1204 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC092650.2-201ENST00000619984 902 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 AC006065.5-201ENST00000623427 349 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ABCD3P28288 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC107068.1-201ENST00000563286 4218 ntBASIC4.38□□□□□ -1.71
ABCD3P28288 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
ABCD3P28288 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
ABCD3P28288 AC090337.1-201ENST00000579651 2074 ntBASIC4.37□□□□□ -1.71
ABCD3P28288 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCD3P28288 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.37□□□□□ -1.71
ABCD3P28288 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ABCD3P28288 AC103591.2-201ENST00000265259 766 ntBASIC4.37□□□□□ -1.71
ABCD3P28288 SNORD113-6-201ENST00000363345 75 ntBASIC4.37□□□□□ -1.71
ABCD3P28288 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ABCD3P28288 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ABCD3P28288 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ABCD3P28288 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ABCD3P28288 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ABCD3P28288 MIR937-201ENST00000401271 86 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms