Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP24386 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP24386 AL389895.1-201ENST00000554127 252 ntBASIC4.4□□□□□ -1.71
CHMP24386 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP24386 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP24386 MIR4270-201ENST00000581799 70 ntBASIC4.4□□□□□ -1.71
CHMP24386 ELOCP28-201ENST00000590044 317 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP24386 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP24386 BNIP3P26-201ENST00000600827 554 ntBASIC4.4□□□□□ -1.71
CHMP24386 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP24386 HMGN2P28-201ENST00000606102 262 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC007390.2-201ENST00000606229 3803 ntBASIC4.4□□□□□ -1.71
CHMP24386 AL159169.3-201ENST00000608871 561 ntBASIC4.4□□□□□ -1.71
CHMP24386 AL136295.6-201ENST00000610486 658 ntBASIC4.4□□□□□ -1.71
CHMP24386 MIR6820-201ENST00000611508 62 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC069209.1-201ENST00000619282 651 ntBASIC4.4□□□□□ -1.71
CHMP24386 AL022401.1-201ENST00000619498 108 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC009318.4-201ENST00000620496 486 ntBASIC4.4□□□□□ -1.71
CHMP24386 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP24386 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.71
CHMP24386 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP24386 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP24386 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC012020.1-201ENST00000624541 1728 ntBASIC4.4□□□□□ -1.71
CHMP24386 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHMP24386 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHMP24386 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.4□□□□□ -1.71
CHMP24386 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP24386 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.71
CHMP24386 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CHMP24386 MTND4P26-201ENST00000415971 1359 ntBASIC4.4□□□□□ -1.71
CHMP24386 AC092435.4-201ENST00000623012 4159 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
CHMP24386 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP24386 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 CDR1-202ENST00000625883 1485 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC012618.3-205ENST00000637896 1496 ntBASIC4.39□□□□□ -1.71
CHMP24386 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 SNORA51.6-201ENST00000384151 125 ntBASIC4.39□□□□□ -1.71
CHMP24386 Y_RNA.465-201ENST00000384293 102 ntBASIC4.39□□□□□ -1.71
CHMP24386 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 RN7SKP177-201ENST00000410567 355 ntBASIC4.39□□□□□ -1.71
CHMP24386 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP24386 AC092832.1-201ENST00000422934 400 ntBASIC4.39□□□□□ -1.71
CHMP24386 AL451139.1-201ENST00000434718 346 ntBASIC4.39□□□□□ -1.71
CHMP24386 VN1R10P-201ENST00000447106 875 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC104651.2-201ENST00000447549 528 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP24386 PLGLA-201ENST00000465668 449 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC022034.3-201ENST00000471393 478 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC007686.1-201ENST00000488511 463 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 MTCO3P44-201ENST00000510977 541 ntBASIC4.39□□□□□ -1.71
CHMP24386 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
CHMP24386 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.39□□□□□ -1.71
CHMP24386 OR4R3P-201ENST00000525084 838 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP24386 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP24386 FKBP1BP1-201ENST00000553366 325 ntBASIC4.39□□□□□ -1.71
CHMP24386 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP24386 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
CHMP24386 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.39□□□□□ -1.71
CHMP24386 AC107075.1-201ENST00000613695 314 ntBASIC4.39□□□□□ -1.71
CHMP24386 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.39□□□□□ -1.71
CHMP24386 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP24386 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.39□□□□□ -1.71
CHMP24386 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP24386 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP24386 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CHMP24386 AC026951.1-201ENST00000559530 2459 ntBASIC4.38□□□□□ -1.71
CHMP24386 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 NCLP2-201ENST00000416078 1462 ntBASIC4.38□□□□□ -1.71
CHMP24386 KPNA2P2-201ENST00000419546 1489 ntBASIC4.38□□□□□ -1.71
CHMP24386 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHMP24386 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP24386 OR56B2P-201ENST00000317102 954 ntBASIC4.38□□□□□ -1.71
CHMP24386 SNORD82-201ENST00000365530 70 ntBASIC4.38□□□□□ -1.71
CHMP24386 SNRPEP2-201ENST00000397592 279 ntBASIC4.38□□□□□ -1.71
CHMP24386 MIR921-201ENST00000401133 56 ntBASIC4.38□□□□□ -1.71
CHMP24386 AL024474.1-201ENST00000404655 591 ntBASIC4.38□□□□□ -1.71
CHMP24386 RPL23AP48-201ENST00000406913 488 ntBASIC4.38□□□□□ -1.71
CHMP24386 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
CHMP24386 RPL21P108-201ENST00000413857 481 ntBASIC4.38□□□□□ -1.71
CHMP24386 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.38□□□□□ -1.71
CHMP24386 OFD1P18Y-201ENST00000420889 959 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms