Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC022916.3-201ENST00000592961 742 ntBASIC3.06□□□□□ -1.92
CCL1P22362 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.06□□□□□ -1.92
CCL1P22362 AC011472.4-201ENST00000615848 491 ntBASIC3.06□□□□□ -1.92
CCL1P22362 CR392039.4-201ENST00000624968 501 ntBASIC3.06□□□□□ -1.92
CCL1P22362 AC112200.1-201ENST00000625015 234 ntBASIC3.06□□□□□ -1.92
CCL1P22362 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL1P22362 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL1P22362 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL1P22362 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCL1P22362 MIR30E-201ENST00000362104 92 ntBASIC3.05□□□□□ -1.92
CCL1P22362 RNA5SP167-201ENST00000365461 116 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
CCL1P22362 U8.11-201ENST00000384699 133 ntBASIC3.05□□□□□ -1.92
CCL1P22362 U8.12-201ENST00000384701 133 ntBASIC3.05□□□□□ -1.92
CCL1P22362 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 RPL17P36-201ENST00000420302 549 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AL031663.1-201ENST00000437445 219 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 AL157827.1-201ENST00000447622 132 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.05□□□□□ -1.92
CCL1P22362 RPL12P26-201ENST00000452430 487 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AC006539.3-201ENST00000454258 129 ntBASIC3.05□□□□□ -1.92
CCL1P22362 C1DP3-201ENST00000455013 423 ntBASIC3.05□□□□□ -1.92
CCL1P22362 TVP23BP2-201ENST00000455082 615 ntBASIC3.05□□□□□ -1.92
CCL1P22362 U8.18-201ENST00000459285 133 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AC010401.1-201ENST00000463867 348 ntBASIC3.05□□□□□ -1.92
CCL1P22362 RN7SL132P-201ENST00000478131 296 ntBASIC3.05□□□□□ -1.92
CCL1P22362 GAPDHP36-201ENST00000480688 918 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL1P22362 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.05□□□□□ -1.92
CCL1P22362 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.05□□□□□ -1.92
CCL1P22362 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.05□□□□□ -1.92
CCL1P22362 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
CCL1P22362 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CCL1P22362 AC011602.1-201ENST00000546484 331 ntBASIC3.05□□□□□ -1.92
CCL1P22362 PARP1P2-201ENST00000556806 195 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.05□□□□□ -1.92
CCL1P22362 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.05□□□□□ -1.92
CCL1P22362 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.05□□□□□ -1.92
CCL1P22362 MIR5685-201ENST00000579080 79 ntBASIC3.05□□□□□ -1.92
CCL1P22362 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AL451086.1-201ENST00000605596 223 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AP003117.2-201ENST00000606010 545 ntBASIC3.05□□□□□ -1.92
CCL1P22362 AC105429.2-201ENST00000610567 517 ntBASIC3.05□□□□□ -1.92
CCL1P22362 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCL1P22362 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCL1P22362 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CCL1P22362 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CCL1P22362 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 DCAF13P1-201ENST00000495256 1330 ntBASIC3.04□□□□□ -1.92
CCL1P22362 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCL1P22362 CCNB2P1-201ENST00000399411 1150 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.04□□□□□ -1.92
CCL1P22362 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 HMGB1P32-201ENST00000425971 565 ntBASIC3.04□□□□□ -1.92
CCL1P22362 ARL5AP3-201ENST00000439327 386 ntBASIC3.04□□□□□ -1.92
CCL1P22362 CBX1P4-201ENST00000439415 457 ntBASIC3.04□□□□□ -1.92
CCL1P22362 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 HMGN2P7-201ENST00000456186 273 ntBASIC3.04□□□□□ -1.92
CCL1P22362 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 HMGB3P30-201ENST00000457863 606 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AC087312.1-201ENST00000471411 480 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AC110768.1-201ENST00000509222 400 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.04□□□□□ -1.92
CCL1P22362 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 IGKV2D-23-201ENST00000518179 286 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.04□□□□□ -1.92
CCL1P22362 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.04□□□□□ -1.92
CCL1P22362 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.04□□□□□ -1.92
CCL1P22362 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.04□□□□□ -1.92
CCL1P22362 AC020914.6-201ENST00000594327 272 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AC244505.7-201ENST00000599675 272 ntBASIC3.04□□□□□ -1.92
CCL1P22362 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.04□□□□□ -1.92
CCL1P22362 MIR6748-201ENST00000610433 71 ntBASIC3.04□□□□□ -1.92
CCL1P22362 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.04□□□□□ -1.92
CCL1P22362 AC019080.5-201ENST00000624891 757 ntBASIC3.04□□□□□ -1.92
CCL1P22362 AL356274.2-201ENST00000624379 3752 ntBASIC3.04□□□□□ -1.92
CCL1P22362 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCL1P22362 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCL1P22362 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms