Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 LLPHP1-201ENST00000603571 367 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC105429.2-201ENST00000610567 517 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 AC020978.9-201ENST00000624380 1141 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 PWAR6-201ENST00000552334 4618 ntBASIC3.19□□□□□ -1.9
ATF1P18846 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
ATF1P18846 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 AC025125.1-201ENST00000624743 1922 ntBASIC3.19□□□□□ -1.9
ATF1P18846 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF1P18846 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF1P18846 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF1P18846 SPRR2C-201ENST00000290702 219 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC126755.2-208ENST00000327792 462 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC138969.1-213ENST00000331436 462 ntBASIC3.18□□□□□ -1.9
ATF1P18846 RNU6-452P-201ENST00000384406 107 ntBASIC3.18□□□□□ -1.9
ATF1P18846 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC105402.1-201ENST00000413336 545 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 RNF19BPX-201ENST00000426224 625 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
ATF1P18846 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AL138799.3-201ENST00000438968 350 ntBASIC3.18□□□□□ -1.9
ATF1P18846 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.18□□□□□ -1.9
ATF1P18846 HMGN2P21-201ENST00000447764 270 ntBASIC3.18□□□□□ -1.9
ATF1P18846 HMGB1P5-202ENST00000451497 985 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
ATF1P18846 HMGN2P7-201ENST00000456186 273 ntBASIC3.18□□□□□ -1.9
ATF1P18846 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 RPL6P9-201ENST00000466502 859 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC022034.3-201ENST00000471393 478 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC084357.1-201ENST00000473404 255 ntBASIC3.18□□□□□ -1.9
ATF1P18846 RPL21P103-201ENST00000479921 488 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC026979.1-201ENST00000492525 396 ntBASIC3.18□□□□□ -1.9
ATF1P18846 RN7SL323P-201ENST00000494712 295 ntBASIC3.18□□□□□ -1.9
ATF1P18846 HPRT1P1-201ENST00000509498 657 ntBASIC3.18□□□□□ -1.9
ATF1P18846 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.18□□□□□ -1.9
ATF1P18846 AC108064.1-201ENST00000513791 460 ntBASIC3.18□□□□□ -1.9
ATF1P18846 RNU6-491P-201ENST00000516099 110 ntBASIC3.18□□□□□ -1.9
ATF1P18846 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.18□□□□□ -1.9
ATF1P18846 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 AL121594.4-201ENST00000556211 1196 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF1P18846 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF1P18846 ZNF92P3-201ENST00000596594 954 ntBASIC3.18□□□□□ -1.9
ATF1P18846 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.18□□□□□ -1.9
ATF1P18846 BNIP3P38-201ENST00000601117 544 ntBASIC3.18□□□□□ -1.9
ATF1P18846 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 AC103710.3-201ENST00000608157 948 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC006338.2-201ENST00000616864 791 ntBASIC3.18□□□□□ -1.9
ATF1P18846 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 AP004607.9-201ENST00000618202 316 ntBASIC3.18□□□□□ -1.9
ATF1P18846 AC004943.3-201ENST00000624116 600 ntBASIC3.18□□□□□ -1.9
ATF1P18846 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF1P18846 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.17□□□□□ -1.9
ATF1P18846 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 AC007656.2-201ENST00000624902 4547 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC024560.2-201ENST00000507981 1497 ntBASIC3.17□□□□□ -1.9
ATF1P18846 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ATF1P18846 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 RNU1-13P-201ENST00000384499 162 ntBASIC3.17□□□□□ -1.9
ATF1P18846 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
ATF1P18846 MTCO3P31-201ENST00000405526 789 ntBASIC3.17□□□□□ -1.9
ATF1P18846 LINC01881-201ENST00000416103 412 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms