Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZYXP1-201ENST00000617638 118 ntBASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 OR1S1-201ENST00000624470 978 ntBASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAB40ALP0C0E4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL121657.1-201ENST00000327215 531 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 RNA5SP515-201ENST00000364570 118 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL450992.3-201ENST00000413192 568 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC004987.3-201ENST00000413879 771 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC008280.1-201ENST00000418851 412 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL139095.3-201ENST00000419672 1203 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 RPL21P91-201ENST00000429231 479 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 MTCO1P3-201ENST00000429327 192 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL512326.1-201ENST00000443050 721 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL009048.1-201ENST00000450437 298 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 Z99714.1-201ENST00000450463 807 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 MYL12AP1-201ENST00000518490 515 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC090151.1-201ENST00000520784 730 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL161713.1-201ENST00000555538 145 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AL121834.1-201ENST00000572284 509 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AP003973.1-201ENST00000604639 691 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 RNU4-5P-201ENST00000607255 135 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 MIR8059-201ENST00000620427 81 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC023510.2-201ENST00000622162 746 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 MFSD8-245ENST00000641743 948 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 NXPH1-205ENST00000602349 1953 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 ERCC6-202ENST00000374127 1782 ntBASIC4.12□□□□□ -1.75
RAB40ALP0C0E4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AL158163.1-201ENST00000603915 1649 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 ZNF29P-201ENST00000225587 168 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RNU6-839P-201ENST00000363347 108 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RNU6-707P-201ENST00000364647 95 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AL022722.2-201ENST00000402519 180 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC233981.1-201ENST00000423224 461 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RPF2P1-201ENST00000424137 906 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 NANOGP5-201ENST00000424456 877 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 NPM1P34-201ENST00000428821 893 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 OR10R1P-201ENST00000441524 1141 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 HMGB1P16-201ENST00000447155 540 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC112492.1-201ENST00000449607 712 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 NF1P3-201ENST00000457709 450 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RPS7P7-201ENST00000463499 571 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RPS20P21-201ENST00000466859 343 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC020898.1-201ENST00000474167 787 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC008958.1-201ENST00000511047 682 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 RNA5SP135-201ENST00000517019 125 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 OR4C2P-201ENST00000530855 1064 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC084824.1-201ENST00000550917 1005 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms