Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MIR4716-201ENST00000579628 84 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.94□□□□□ -1.94
CTSDP07339 AC067959.1-201ENST00000604334 379 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC099778.2-201ENST00000610904 211 ntBASIC2.94□□□□□ -1.94
CTSDP07339 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 AP003355.3-201ENST00000623465 114 ntBASIC2.94□□□□□ -1.94
CTSDP07339 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CTSDP07339 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CTSDP07339 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.94□□□□□ -1.94
CTSDP07339 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.94□□□□□ -1.94
CTSDP07339 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.93□□□□□ -1.94
CTSDP07339 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 FAM91A3P-201ENST00000456826 2544 ntBASIC2.93□□□□□ -1.94
CTSDP07339 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 AF127577.6-201ENST00000623352 2191 ntBASIC2.93□□□□□ -1.94
CTSDP07339 SRP72P2-201ENST00000344851 1979 ntBASIC2.93□□□□□ -1.94
CTSDP07339 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 NMD3P1-201ENST00000439704 1488 ntBASIC2.93□□□□□ -1.94
CTSDP07339 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 HMGB1P13-201ENST00000406019 642 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC017079.2-201ENST00000416102 485 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 GTF2IP23-201ENST00000423746 351 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 RPL7P2-201ENST00000427639 268 ntBASIC2.93□□□□□ -1.94
CTSDP07339 RPL23AP4-201ENST00000427757 463 ntBASIC2.93□□□□□ -1.94
CTSDP07339 BX890604.2-201ENST00000427883 474 ntBASIC2.93□□□□□ -1.94
CTSDP07339 EIF2S2P3-201ENST00000428356 999 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.93□□□□□ -1.94
CTSDP07339 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.93□□□□□ -1.94
CTSDP07339 AC007967.1-201ENST00000455422 1159 ntBASIC2.93□□□□□ -1.94
CTSDP07339 RPS27P29-201ENST00000463110 252 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC006511.1-201ENST00000470614 315 ntBASIC2.93□□□□□ -1.94
CTSDP07339 MTND6P6-201ENST00000478031 263 ntBASIC2.93□□□□□ -1.94
CTSDP07339 VN1R105P-201ENST00000486595 910 ntBASIC2.93□□□□□ -1.94
CTSDP07339 RN7SL323P-201ENST00000494712 295 ntBASIC2.93□□□□□ -1.94
CTSDP07339 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 SNORA64.4-201ENST00000516632 81 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 AC107934.2-201ENST00000518653 310 ntBASIC2.93□□□□□ -1.94
CTSDP07339 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.93□□□□□ -1.94
CTSDP07339 CYCSP30-201ENST00000546447 172 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC053481.4-201ENST00000583164 216 ntBASIC2.93□□□□□ -1.94
CTSDP07339 SS18L2P2-201ENST00000583960 235 ntBASIC2.93□□□□□ -1.94
CTSDP07339 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.93□□□□□ -1.94
CTSDP07339 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.93□□□□□ -1.94
CTSDP07339 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.93□□□□□ -1.94
CTSDP07339 AL731566.2-201ENST00000618971 317 ntBASIC2.93□□□□□ -1.94
CTSDP07339 CFTRP2-201ENST00000634304 199 ntBASIC2.93□□□□□ -1.94
CTSDP07339 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTSDP07339 AL356317.1-201ENST00000396110 1436 ntBASIC2.93□□□□□ -1.94
CTSDP07339 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CTSDP07339 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CTSDP07339 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CTSDP07339 RNU6-697P-201ENST00000363348 107 ntBASIC2.92□□□□□ -1.94
CTSDP07339 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTSDP07339 AC245054.1-201ENST00000420944 258 ntBASIC2.92□□□□□ -1.94
CTSDP07339 AL591419.1-201ENST00000427423 339 ntBASIC2.92□□□□□ -1.94
CTSDP07339 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.92□□□□□ -1.94
CTSDP07339 B3GNT2P1-201ENST00000434960 952 ntBASIC2.92□□□□□ -1.94
CTSDP07339 RPL23AP22-201ENST00000437556 453 ntBASIC2.92□□□□□ -1.94
CTSDP07339 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.92□□□□□ -1.94
CTSDP07339 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.92□□□□□ -1.94
CTSDP07339 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 AP000873.1-201ENST00000463987 400 ntBASIC2.92□□□□□ -1.94
CTSDP07339 RN7SL132P-201ENST00000478131 296 ntBASIC2.92□□□□□ -1.94
CTSDP07339 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CTSDP07339 HMGB1P21-201ENST00000502313 581 ntBASIC2.92□□□□□ -1.94
CTSDP07339 AC021146.5-201ENST00000503544 545 ntBASIC2.92□□□□□ -1.94
CTSDP07339 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.92□□□□□ -1.94
CTSDP07339 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.92□□□□□ -1.94
CTSDP07339 RN7SKP21-201ENST00000516503 220 ntBASIC2.92□□□□□ -1.94
CTSDP07339 RNU6-352P-201ENST00000516908 107 ntBASIC2.92□□□□□ -1.94
CTSDP07339 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.92□□□□□ -1.94
CTSDP07339 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms