Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A1P02462 AC006518.1-201ENST00000541449 943 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A1P02462 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A1P02462 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 AL356321.1-201ENST00000621360 228 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 AC110801.1-201ENST00000623590 212 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
COL4A1P02462 AC008079.2-201ENST00000623543 20396 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.93□□□□□ -1.78
COL4A1P02462 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A1P02462 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A1P02462 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL4A1P02462 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL4A1P02462 AC125336.1-201ENST00000508893 2827 ntBASIC3.92□□□□□ -1.78
COL4A1P02462 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A1P02462 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A1P02462 BX890604.2-201ENST00000427883 474 ntBASIC3.92□□□□□ -1.78
COL4A1P02462 AC021205.2-201ENST00000480069 347 ntBASIC3.92□□□□□ -1.78
COL4A1P02462 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 AC091826.1-201ENST00000514065 313 ntBASIC3.92□□□□□ -1.78
COL4A1P02462 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 AP000859.1-201ENST00000525536 307 ntBASIC3.92□□□□□ -1.78
COL4A1P02462 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A1P02462 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A1P02462 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.92□□□□□ -1.78
COL4A1P02462 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
COL4A1P02462 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL4A1P02462 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
COL4A1P02462 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.91□□□□□ -1.78
COL4A1P02462 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
COL4A1P02462 NPM1P38-201ENST00000403835 865 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 AC011242.1-201ENST00000433596 1158 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.91□□□□□ -1.78
COL4A1P02462 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.91□□□□□ -1.78
COL4A1P02462 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL4A1P02462 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 RN7SKP116-201ENST00000516902 319 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.91□□□□□ -1.78
COL4A1P02462 PRELID3BP8-201ENST00000604148 295 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 LSM1P2-201ENST00000604911 322 ntBASIC3.91□□□□□ -1.78
COL4A1P02462 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
COL4A1P02462 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A1P02462 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.91□□□□□ -1.78
COL4A1P02462 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.91□□□□□ -1.78
COL4A1P02462 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.91□□□□□ -1.78
COL4A1P02462 ANKRD36P1-201ENST00000344424 659 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 ZNF603P-201ENST00000405613 487 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 AC007899.1-201ENST00000412776 775 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.9□□□□□ -1.78
COL4A1P02462 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.9□□□□□ -1.78
COL4A1P02462 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.9□□□□□ -1.78
COL4A1P02462 AC012123.2-201ENST00000485809 248 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.9□□□□□ -1.78
COL4A1P02462 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.9□□□□□ -1.78
COL4A1P02462 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.9□□□□□ -1.78
COL4A1P02462 PSMA2P1-201ENST00000526365 646 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.9□□□□□ -1.78
COL4A1P02462 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.9□□□□□ -1.78
COL4A1P02462 AC018690.1-201ENST00000608144 626 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 AC009237.17-201ENST00000618111 748 ntBASIC3.9□□□□□ -1.78
COL4A1P02462 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL4A1P02462 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
COL4A1P02462 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL4A1P02462 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.78
COL4A1P02462 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL4A1P02462 OR5H2-201ENST00000355273 945 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL4A1P02462 RPL5P18-201ENST00000406671 891 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 DPPA2P2-201ENST00000418220 897 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 USP9YP36-201ENST00000424581 829 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 RPL35AP12-201ENST00000425362 338 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 USP9YP31-201ENST00000431405 881 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 RN7SKP132-201ENST00000516001 208 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 RNU1-143P-201ENST00000516296 146 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 NARSP2-201ENST00000518524 679 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL4A1P02462 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 U1.23-201ENST00000610293 146 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 RNU1-68P-201ENST00000615382 146 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 U1.39-201ENST00000621562 146 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 SCARNA15.3-201ENST00000626315 122 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 SCARNA4.1-201ENST00000628597 123 ntBASIC3.9□□□□□ -1.79
COL4A1P02462 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A1P02462 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms