Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC009117.1-201ENST00000563948 554 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 MIR5095-201ENST00000578844 88 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX1O00570 AC006504.6-201ENST00000590142 199 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC011497.2-201ENST00000600255 639 ntBASIC6.08□□□□□ -1.44
SOX1O00570 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 AC009161.2-201ENST00000624626 138 ntBASIC6.08□□□□□ -1.44
SOX1O00570 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 AC134503.1-201ENST00000633048 54 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC091046.3-201ENST00000631455 1574 ntBASIC6.08□□□□□ -1.44
SOX1O00570 MTCO1P9-201ENST00000505577 1534 ntBASIC6.08□□□□□ -1.44
SOX1O00570 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX1O00570 AC009120.2-204ENST00000621548 2032 ntBASIC6.08□□□□□ -1.44
SOX1O00570 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX1O00570 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 AP002907.1-201ENST00000606361 1430 ntBASIC6.08□□□□□ -1.44
SOX1O00570 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX1O00570 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 RAD17P2-201ENST00000451754 1977 ntBASIC6.07□□□□□ -1.44
SOX1O00570 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX1O00570 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 AC097504.1-201ENST00000515103 2415 ntBASIC6.07□□□□□ -1.44
SOX1O00570 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 AC105114.1-201ENST00000624795 1862 ntBASIC6.07□□□□□ -1.44
SOX1O00570 MAPK10-344ENST00000641718 3746 ntBASIC6.07□□□□□ -1.44
SOX1O00570 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX1O00570 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 AC105235.1-201ENST00000623208 1816 ntBASIC6.07□□□□□ -1.44
SOX1O00570 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 AC112243.1-201ENST00000623949 3851 ntBASIC6.07□□□□□ -1.44
SOX1O00570 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 OR2M1P-201ENST00000318104 951 ntBASIC6.07□□□□□ -1.44
SOX1O00570 MIR133B-201ENST00000362210 119 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RNA5SP388-201ENST00000362584 119 ntBASIC6.07□□□□□ -1.44
SOX1O00570 Y_RNA.381-201ENST00000365666 102 ntBASIC6.07□□□□□ -1.44
SOX1O00570 Y_RNA.422-201ENST00000384054 114 ntBASIC6.07□□□□□ -1.44
SOX1O00570 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SOX1O00570 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 GLULP6-201ENST00000399502 913 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPL7P58-201ENST00000402913 758 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPL7P25-201ENST00000404151 721 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AL136131.1-201ENST00000406079 803 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AL162578.1-201ENST00000406202 378 ntBASIC6.07□□□□□ -1.44
SOX1O00570 TXNP7-201ENST00000406296 293 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RNU6-1068P-201ENST00000410958 103 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPL18P10-201ENST00000425606 538 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPL36AP53-201ENST00000432891 316 ntBASIC6.07□□□□□ -1.44
SOX1O00570 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 RPL5P25-201ENST00000441148 775 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC023141.8-201ENST00000442554 208 ntBASIC6.07□□□□□ -1.44
SOX1O00570 BRK1P2-201ENST00000442875 223 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC011742.2-201ENST00000443818 352 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC090142.1-201ENST00000465776 462 ntBASIC6.07□□□□□ -1.44
SOX1O00570 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 AC092824.1-201ENST00000483524 576 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPL23AP72-201ENST00000492447 435 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RPSAP51-201ENST00000497462 645 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RNA5SP401-201ENST00000515920 127 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RN7SKP21-201ENST00000516503 220 ntBASIC6.07□□□□□ -1.44
SOX1O00570 RN7SKP116-201ENST00000516902 319 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX1O00570 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX1O00570 PMS2P3-207ENST00000529061 717 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX1O00570 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 AL389895.1-201ENST00000554127 252 ntBASIC6.07□□□□□ -1.44
SOX1O00570 BNIP3P5-201ENST00000562290 498 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC122134.1-201ENST00000565664 1104 ntBASIC6.07□□□□□ -1.44
SOX1O00570 MRPS21P9-201ENST00000571150 257 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX1O00570 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 AL355802.3-201ENST00000607571 545 ntBASIC6.07□□□□□ -1.44
SOX1O00570 MIR92B-201ENST00000607575 96 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC105429.2-201ENST00000610567 517 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC010205.1-201ENST00000616668 449 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX1O00570 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX1O00570 AC138305.3-201ENST00000624988 240 ntBASIC6.07□□□□□ -1.44
SOX1O00570 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 CDRT1-208ENST00000630868 794 ntBASIC6.07□□□□□ -1.44
SOX1O00570 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 AL022323.4-201ENST00000623980 13120 ntBASIC6.07□□□□□ -1.44
SOX1O00570 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms