Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01613-201ENST00000561476 2780 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 LINC02019-201ENST00000608605 2060 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AP002370.1-201ENST00000528055 1602 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 TNPO1P2-201ENST00000426249 2665 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-1040P-201ENST00000383974 107 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 SNORD3H-201ENST00000384486 214 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 GSTM3P2-201ENST00000412746 530 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC068533.1-201ENST00000418542 415 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC005019.1-201ENST00000436455 431 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 COL11A2P1-205ENST00000441798 676 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MTND1P17-201ENST00000448961 204 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AP001992.1-205ENST00000462248 379 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 RPL7P43-201ENST00000478876 753 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AF213884.1-201ENST00000488102 463 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MRPS35P2-201ENST00000508242 191 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC083906.1-201ENST00000509298 406 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC093853.1-201ENST00000515689 483 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 SNORA25.10-201ENST00000515926 124 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 RNU7-51P-201ENST00000516560 62 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-256P-201ENST00000516747 97 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC090136.1-201ENST00000520009 240 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 HMGB1P41-201ENST00000520234 440 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 MIR3672-201ENST00000584290 82 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC073539.2-201ENST00000597113 165 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC114477.1-201ENST00000605097 605 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 AC008013.2-202ENST00000637965 364 ntBASIC6.4□□□□□ -1.38
PCDHB11Q9Y5F2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 PWAR1-201ENST00000624188 2414 ntBASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 AL139384.2-201ENST00000613809 3590 ntBASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 AC244517.1-201ENST00000606030 2086 ntBASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHB11Q9Y5F2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 MFSD8-219ENST00000641228 2559 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 PPIAP24-201ENST00000328558 471 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-511P-201ENST00000363496 107 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-82P-201ENST00000363970 107 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RNA5SP435-201ENST00000364044 108 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RNA5SP433-201ENST00000364491 114 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-310P-201ENST00000384655 107 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 UBE2V1P2-201ENST00000397758 440 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AL603908.1-201ENST00000406098 201 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AL591848.1-201ENST00000413092 322 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC115283.1-201ENST00000427353 400 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 BRWD1P3-201ENST00000428816 390 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC104073.1-201ENST00000451988 151 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 CBX1P2-201ENST00000453841 458 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AL162395.1-201ENST00000457882 422 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 SIAH1P1-201ENST00000479411 923 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 SNORA58-201ENST00000505219 137 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC093870.1-201ENST00000506837 213 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 SNORA74.1-201ENST00000516320 180 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms