Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL353748.1-201ENST00000440753 474 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL36AP13-201ENST00000457490 317 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL21P18-201ENST00000469899 480 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL21P103-201ENST00000479921 488 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC073522.1-201ENST00000483312 377 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 KRT19P6-201ENST00000510983 209 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL7L1P13-201ENST00000511702 739 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC112198.4-201ENST00000515450 351 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 HMGB1P1-201ENST00000522557 636 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 OR5M7P-201ENST00000526140 972 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC007599.1-201ENST00000568688 1174 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL23AP87-202ENST00000573039 466 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AP001180.3-201ENST00000582221 145 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 BNIP3P4-201ENST00000604946 565 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC090246.1-201ENST00000616499 426 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 MIR7151-201ENST00000617477 60 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AC067852.7-201ENST00000623270 535 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 AP005264.7-201ENST00000625003 745 ntBASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4BQ9Y4P1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-468P-201ENST00000384003 109 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 MIR513A2-201ENST00000385249 127 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-932P-201ENST00000391108 106 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RNU2-21P-201ENST00000410368 188 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 PGBD4P8-201ENST00000412993 562 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC004552.1-201ENST00000419089 348 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RPL31P45-201ENST00000419532 356 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 COX6CP15-201ENST00000426313 211 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RPS27AP12-201ENST00000429552 465 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RPL21P110-201ENST00000433345 446 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RPS26P30-201ENST00000443431 335 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 HSFY3P-201ENST00000444242 1191 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC114755.5-201ENST00000447760 831 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC018635.1-201ENST00000468292 1030 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RPS26P3-201ENST00000470205 348 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC015724.1-201ENST00000478577 156 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC090543.2-201ENST00000483963 348 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC004057.1-201ENST00000485827 348 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 MTND3P3-201ENST00000505004 126 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 RN7SKP21-201ENST00000516503 220 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 MIR4789-201ENST00000577469 82 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 DNAJC19P3-201ENST00000594491 331 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC091488.1-201ENST00000604239 660 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AL139286.1-201ENST00000604465 483 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 BNIP3P31-201ENST00000604515 566 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC099669.2-201ENST00000616549 437 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 AC068724.3-201ENST00000625906 87 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 MIR492-201ENST00000638676 116 ntBASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4BQ9Y4P1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 MARK2P15-201ENST00000432204 2186 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 HMGB3P19-201ENST00000403971 560 ntBASIC3.88□□□□□ -1.79
ATG4BQ9Y4P1 AL355615.1-201ENST00000406187 641 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms