Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MTCYBP3-201ENST00000445588 1137 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL606662.1-201ENST00000445763 553 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 CEACAMP6-201ENST00000452007 574 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 OR52A4P-201ENST00000472867 958 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC046144.1-201ENST00000478559 1853 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RPL7P18-201ENST00000478965 734 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 VPS26AP1-201ENST00000483197 979 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RN7SL558P-201ENST00000497468 299 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC109445.1-201ENST00000512356 383 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RNU2-30P-201ENST00000516209 141 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RNU6-759P-201ENST00000516740 103 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 OR5M2P-201ENST00000529003 936 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC023161.2-201ENST00000551218 780 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 ISCA1P3-201ENST00000577104 373 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MIR4277-201ENST00000578298 84 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 SGO1P1-201ENST00000603525 1447 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MIR7973-1-201ENST00000614683 76 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC023158.2-201ENST00000614876 543 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL442639.1-201ENST00000625030 1899 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC091046.3-201ENST00000631455 1574 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 OR10J6P-201ENST00000289731 930 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 RPL32P3-201ENST00000359025 275 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 Y_RNA.77-201ENST00000362962 107 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 MIR16-1-201ENST00000385271 89 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 RPS3AP26-201ENST00000398259 784 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 GSTA8P-201ENST00000404253 637 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL021407.1-201ENST00000404531 386 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL590290.1-201ENST00000405336 380 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 ATG4AP1-201ENST00000416893 538 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC114814.2-201ENST00000419195 485 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 RPL23AP1-201ENST00000428990 471 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 ELOCP8-201ENST00000439309 332 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL357520.1-201ENST00000441557 453 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 ELOCP15-201ENST00000442090 332 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 RPL5P24-201ENST00000463742 885 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC090686.1-201ENST00000481577 749 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC021146.8-201ENST00000507455 733 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC079395.1-201ENST00000510981 262 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 TCP11X3P-202ENST00000514289 1254 ntBASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.09□□□□□ -1.59
SSX2IPQ9Y2D8 UBE2NP1-201ENST00000545592 458 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms