Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHANK2Q9UPX8 AC024341.1-201ENST00000526444 1552 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 RNA5SP296-201ENST00000410523 111 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 MTND4P22-201ENST00000413116 1169 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 AL158071.1-201ENST00000430315 461 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 AC107083.1-201ENST00000439643 279 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 OR5AP1P-201ENST00000529730 940 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 AL121594.4-201ENST00000556211 1196 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 AC015802.5-201ENST00000607478 399 ntBASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHANK2Q9UPX8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SHANK2Q9UPX8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.09□□□□□ -1.6
SHANK2Q9UPX8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHANK2Q9UPX8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.09□□□□□ -1.6
SHANK2Q9UPX8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 MIR448-201ENST00000362131 111 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 AC087276.1-201ENST00000529659 480 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 AL157394.1-201ENST00000562983 1224 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 MIR4727-201ENST00000622232 55 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 BMS1P21-201ENST00000634565 365 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 AC068647.1-201ENST00000489539 2265 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 NCAPGP1-201ENST00000505112 1814 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 OTUD4P1-201ENST00000237841 3067 ntBASIC5.08□□□□□ -1.6
SHANK2Q9UPX8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SNORA44-201ENST00000384584 132 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SNORA48.8-201ENST00000391324 134 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 RPL5P18-201ENST00000406671 891 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 Z99755.1-201ENST00000414048 380 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 AC026422.1-201ENST00000623961 452 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 RNU1-70P-201ENST00000362618 164 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SNORA5B-201ENST00000363786 132 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 AC063979.1-201ENST00000415539 377 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 RN7SL93P-201ENST00000463035 293 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 SNORD39.4-201ENST00000620099 78 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 AC007998.5-201ENST00000622938 237 ntBASIC5.07□□□□□ -1.6
SHANK2Q9UPX8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 RNU6-7-201ENST00000364784 107 ntBASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 RNU6-8-201ENST00000365467 107 ntBASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 MTND2P11-201ENST00000423638 648 ntBASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 AC097262.1-201ENST00000452559 548 ntBASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 OR4R3P-201ENST00000525084 838 ntBASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK2Q9UPX8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AC119744.1-201ENST00000454746 1715 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AC005183.1-201ENST00000603687 1979 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AC017007.4-201ENST00000503353 1352 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 RNA5SP322-201ENST00000363617 119 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK2Q9UPX8 AC006539.2-201ENST00000601729 572 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms