Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RPL7P47-201ENST00000497299 556 ntBASIC3.36□□□□□ -1.87
CHD7Q9P2D1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CHD7Q9P2D1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD7Q9P2D1 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.36□□□□□ -1.87
CHD7Q9P2D1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHD7Q9P2D1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
CHD7Q9P2D1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHD7Q9P2D1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 OR6R2P-201ENST00000609216 300 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC010480.1-201ENST00000624823 684 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC003685.2-201ENST00000422795 395 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 RPS3AP50-201ENST00000487064 803 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AL035404.1-201ENST00000497982 568 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 AC005798.1-201ENST00000513715 387 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 RNA5SP367-201ENST00000516557 118 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 HMGB1P6-201ENST00000569046 646 ntBASIC3.35□□□□□ -1.87
CHD7Q9P2D1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CHD7Q9P2D1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 HMGB3P14-201ENST00000494195 599 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 APOOP4-201ENST00000513530 597 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC010306.1-201ENST00000523223 1117 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 ZNF90P1-201ENST00000480493 1951 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC083843.3-201ENST00000623679 2186 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 FDX1P2-201ENST00000450769 375 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC006518.1-201ENST00000541449 943 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC018552.3-201ENST00000567416 561 ntBASIC3.34□□□□□ -1.87
CHD7Q9P2D1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.34□□□□□ -1.87
CHD7Q9P2D1 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
CHD7Q9P2D1 DMD-211ENST00000378707 7410 ntTSL 5 BASIC3.34□□□□□ -1.88
CHD7Q9P2D1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 RPS24P12-201ENST00000402084 394 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AC019097.1-201ENST00000424783 735 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 SETP12-201ENST00000514068 805 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 MIR513A2-201ENST00000385249 127 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 BTG4P1-201ENST00000510421 183 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AP000916.1-201ENST00000533869 835 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AC022149.2-201ENST00000621061 203 ntBASIC3.33□□□□□ -1.88
CHD7Q9P2D1 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHD7Q9P2D1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CHD7Q9P2D1 AC010168.2-201ENST00000562691 5428 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms