Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 OR7K1P-201ENST00000546439 926 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL110118.1-201ENST00000553543 400 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC103987.3-201ENST00000582071 292 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC008687.2-201ENST00000597865 520 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPL26P30-202ENST00000602923 645 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC008083.4-201ENST00000615076 444 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL359715.5-201ENST00000623431 443 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 KARSP3-201ENST00000571212 1504 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 Y_RNA.194-201ENST00000363985 102 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 MT-TH-201ENST00000387441 69 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 ATP5F1P4-201ENST00000397288 746 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 CYCSP45-201ENST00000402289 315 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AL049697.2-201ENST00000403708 294 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 PRELID3BP11-201ENST00000414230 479 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 TMBIM7P-201ENST00000418074 855 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC012519.1-201ENST00000424588 610 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC010881.1-201ENST00000433830 235 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 NPM1P33-201ENST00000438918 872 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 RPS26P56-201ENST00000444468 240 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC112206.1-201ENST00000468416 477 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC013828.1-201ENST00000481845 158 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 KRT19P6-201ENST00000510983 209 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 RNU6-202P-201ENST00000515998 96 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC133555.2-201ENST00000550213 292 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AL049839.1-201ENST00000556151 657 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC020914.6-201ENST00000594327 272 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC006927.3-201ENST00000638789 384 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 AC092376.2-201ENST00000622621 4116 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 SMG1P6-201ENST00000532337 2930 ntBASIC5.47□□□□□ -1.53
VTA1Q9NP79 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
VTA1Q9NP79 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTA1Q9NP79 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VTA1Q9NP79 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VTA1Q9NP79 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VTA1Q9NP79 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VTA1Q9NP79 DDX43P2-201ENST00000604753 1354 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 RNU6-603P-201ENST00000411403 107 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 FABP7P1-201ENST00000424004 391 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 UBE2FP3-201ENST00000436366 524 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 COX6CP2-201ENST00000444980 225 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.46□□□□□ -1.54
VTA1Q9NP79 CEACAMP6-201ENST00000452007 574 ntBASIC5.46□□□□□ -1.54
VTA1Q9NP79 AC116337.2-201ENST00000477662 156 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms