Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 CCT8P1-201ENST00000413611 1657 ntBASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BCAS3Q9H6U6 AP002001.2-201ENST00000529025 1469 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC012618.3-205ENST00000637896 1496 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 LINC00561-201ENST00000565815 2738 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 CBX3P1-201ENST00000325243 554 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNU6-433P-201ENST00000363216 104 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNU6-666P-201ENST00000363499 107 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNY4P14-201ENST00000363656 96 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNA5SP223-201ENST00000365174 120 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNU6-297P-201ENST00000384636 107 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC007066.1-201ENST00000392902 381 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AL390316.1-201ENST00000406279 553 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AL139413.1-201ENST00000421309 217 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 TIMM9P3-201ENST00000428659 274 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 USP9YP9-201ENST00000429406 715 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 OR7E125P-201ENST00000443450 846 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC244505.5-201ENST00000443639 207 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 NFU1P2-201ENST00000448700 469 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AL935212.3-201ENST00000450729 284 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 BX842559.2-201ENST00000451418 605 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RPL23AP56-201ENST00000460778 453 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC093267.1-201ENST00000489176 961 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 ARL2BPP6-201ENST00000512757 439 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RNA5SP135-201ENST00000517019 125 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 RAB11AP2-201ENST00000545905 639 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 ANP32BP3-201ENST00000559213 706 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC091489.2-201ENST00000566263 604 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AL354760.1-201ENST00000608357 643 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC007497.1-201ENST00000610421 561 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 AC005332.6-201ENST00000613178 446 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 MKKS-204ENST00000639674 192 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 MFSD8-216ENST00000641147 4009 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 MAPK10-328ENST00000641553 4009 ntBASIC5.64□□□□□ -1.51
BCAS3Q9H6U6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SAMMSON-226ENST00000642089 1582 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC245100.2-201ENST00000454544 1679 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 DBF4P1-201ENST00000412976 1892 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SUGT1P1-201ENST00000379514 476 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SNORA70.10-201ENST00000384515 134 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC013442.1-201ENST00000397347 228 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ARL4AP5-201ENST00000404372 599 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 MTCO2P11-201ENST00000431069 680 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC093414.1-201ENST00000434712 514 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 CEACAMP9-201ENST00000442990 513 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 Z99127.3-201ENST00000448158 395 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms