Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC091046.3-201ENST00000631455 1574 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 BX005019.1-201ENST00000561881 1810 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 MCTS2P-201ENST00000394552 546 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 U3.35-201ENST00000408405 208 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 MTCO3P41-201ENST00000414801 328 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP001324.1-201ENST00000428553 399 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC093716.1-201ENST00000435923 377 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 FGF7P5-201ENST00000441829 291 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP000827.1-201ENST00000527814 258 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 CBX3P7-201ENST00000532876 502 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC015688.2-201ENST00000584523 262 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC011477.5-201ENST00000586571 259 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP003465.2-201ENST00000602571 373 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP003392.5-201ENST00000607857 415 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AL138478.1-201ENST00000612252 832 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC116165.2-201ENST00000616705 206 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC010975.3-201ENST00000618727 978 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP003072.4-201ENST00000624580 310 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AP000843.1-201ENST00000624880 701 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 LINC01808-202ENST00000641680 1116 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 AC135352.1-201ENST00000506173 1418 ntBASIC4.7□□□□□ -1.66
EBF3Q9H4W6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
EBF3Q9H4W6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU4-31P-201ENST00000384211 141 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-1320P-201ENST00000390838 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-1269P-201ENST00000391139 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 MTCO1P56-201ENST00000401674 224 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC011933.1-201ENST00000413334 321 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC004022.2-201ENST00000413824 193 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC011998.1-201ENST00000433403 117 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 MTND5P2-201ENST00000442927 1142 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 NUTF2P3-201ENST00000448540 384 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 OR51B8P-201ENST00000449892 769 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-599P-201ENST00000459383 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-1193P-201ENST00000459461 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC116533.1-201ENST00000459748 321 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RN7SL810P-201ENST00000493031 276 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC116353.3-201ENST00000511215 249 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC119751.1-201ENST00000513357 765 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC026402.1-201ENST00000513642 170 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms